Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Gm11783-201ENSMUST00000119549 885 ntBASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Gm15566-201ENSMUST00000121130 590 ntBASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Gm23699-201ENSMUST00000158835 135 ntBASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Gm28937-201ENSMUST00000185413 695 ntBASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Gm29400-201ENSMUST00000187208 695 ntBASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Gm28662-201ENSMUST00000188446 695 ntBASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Gm28251-201ENSMUST00000188835 695 ntBASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Gm37318-201ENSMUST00000194325 695 ntBASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Gm38017-201ENSMUST00000194768 695 ntBASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Gm37287-201ENSMUST00000195449 695 ntBASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Gm37793-201ENSMUST00000195548 695 ntBASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Gm44100-201ENSMUST00000204329 436 ntBASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga4Q91XY4 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
Pcdhga4Q91XY4 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdhga4Q91XY4 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.6
Pcdhga4Q91XY4 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.27□□□□□ -0.6
Pcdhga4Q91XY4 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.27□□□□□ -0.6
Pcdhga4Q91XY4 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdhga4Q91XY4 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdhga4Q91XY4 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC11.27□□□□□ -0.61
Pcdhga4Q91XY4 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga4Q91XY4 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Pcdhga4Q91XY4 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Pcdhga4Q91XY4 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Pcdhga4Q91XY4 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Pcdhga4Q91XY4 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Pcdhga4Q91XY4 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga4Q91XY4 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.27□□□□□ -0.61
Pcdhga4Q91XY4 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga4Q91XY4 Gm8737-201ENSMUST00000122208 642 ntBASIC11.27□□□□□ -0.61
Pcdhga4Q91XY4 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.27□□□□□ -0.61
Pcdhga4Q91XY4 Gm7666-201ENSMUST00000146631 819 ntBASIC11.27□□□□□ -0.61
Pcdhga4Q91XY4 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Pcdhga4Q91XY4 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga4Q91XY4 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga4Q91XY4 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga4Q91XY4 Gm7940-201ENSMUST00000218195 769 ntBASIC11.27□□□□□ -0.61
Pcdhga4Q91XY4 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga4Q91XY4 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga4Q91XY4 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga4Q91XY4 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga4Q91XY4 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Pcdhga4Q91XY4 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Pcdhga4Q91XY4 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga4Q91XY4 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Pcdhga4Q91XY4 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga4Q91XY4 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga4Q91XY4 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga4Q91XY4 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga4Q91XY4 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga4Q91XY4 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Pcdhga4Q91XY4 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdhga4Q91XY4 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.26□□□□□ -0.61
Pcdhga4Q91XY4 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pcdhga4Q91XY4 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms