Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
StrcQ8VIM6 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
StrcQ8VIM6 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
StrcQ8VIM6 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
StrcQ8VIM6 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
StrcQ8VIM6 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
StrcQ8VIM6 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
StrcQ8VIM6 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
StrcQ8VIM6 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
StrcQ8VIM6 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
StrcQ8VIM6 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
StrcQ8VIM6 Gm38312-201ENSMUST00000195426 1746 ntBASIC13.21□□□□□ -0.29
StrcQ8VIM6 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
StrcQ8VIM6 Gm7701-201ENSMUST00000163185 1479 ntBASIC13.21□□□□□ -0.29
StrcQ8VIM6 AC116596.1-201ENSMUST00000228112 1762 ntBASIC13.21□□□□□ -0.29
StrcQ8VIM6 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC13.21□□□□□ -0.29
StrcQ8VIM6 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
StrcQ8VIM6 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
StrcQ8VIM6 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
StrcQ8VIM6 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.21□□□□□ -0.29
StrcQ8VIM6 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC13.21□□□□□ -0.29
StrcQ8VIM6 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC13.21□□□□□ -0.29
StrcQ8VIM6 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC13.21□□□□□ -0.29
StrcQ8VIM6 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
StrcQ8VIM6 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
StrcQ8VIM6 Gm15650-201ENSMUST00000135451 770 ntTSL 3 BASIC13.21□□□□□ -0.29
StrcQ8VIM6 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC13.21□□□□□ -0.29
StrcQ8VIM6 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC13.21□□□□□ -0.29
StrcQ8VIM6 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
StrcQ8VIM6 Gm5501-201ENSMUST00000165917 832 ntBASIC13.21□□□□□ -0.29
StrcQ8VIM6 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC13.21□□□□□ -0.29
StrcQ8VIM6 Gm5801-201ENSMUST00000182247 780 ntBASIC13.21□□□□□ -0.29
StrcQ8VIM6 Gm3945-201ENSMUST00000196637 683 ntBASIC13.21□□□□□ -0.29
StrcQ8VIM6 Gm4866-201ENSMUST00000197408 589 ntBASIC13.21□□□□□ -0.29
StrcQ8VIM6 Gm42803-201ENSMUST00000201051 451 ntBASIC13.21□□□□□ -0.29
StrcQ8VIM6 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC13.21□□□□□ -0.29
StrcQ8VIM6 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC13.21□□□□□ -0.29
StrcQ8VIM6 AC107711.3-201ENSMUST00000228939 1035 ntBASIC13.21□□□□□ -0.29
StrcQ8VIM6 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
StrcQ8VIM6 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
StrcQ8VIM6 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
StrcQ8VIM6 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
StrcQ8VIM6 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
StrcQ8VIM6 Prl8a1-202ENSMUST00000095926 1682 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
StrcQ8VIM6 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
StrcQ8VIM6 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC13.21□□□□□ -0.3
StrcQ8VIM6 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
StrcQ8VIM6 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
StrcQ8VIM6 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
StrcQ8VIM6 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
StrcQ8VIM6 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
StrcQ8VIM6 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
StrcQ8VIM6 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
StrcQ8VIM6 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
StrcQ8VIM6 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
StrcQ8VIM6 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
StrcQ8VIM6 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
StrcQ8VIM6 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
StrcQ8VIM6 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
StrcQ8VIM6 Gm12397-201ENSMUST00000117674 615 ntBASIC13.2□□□□□ -0.3
StrcQ8VIM6 Olfr333-ps1-201ENSMUST00000122311 940 ntBASIC13.2□□□□□ -0.3
StrcQ8VIM6 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC13.2□□□□□ -0.3
StrcQ8VIM6 Gm26532-201ENSMUST00000180630 690 ntBASIC13.2□□□□□ -0.3
StrcQ8VIM6 Gm44908-201ENSMUST00000208610 266 ntBASIC13.2□□□□□ -0.3
StrcQ8VIM6 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
StrcQ8VIM6 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
StrcQ8VIM6 Gm18806-201ENSMUST00000207607 1775 ntBASIC13.2□□□□□ -0.3
StrcQ8VIM6 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
StrcQ8VIM6 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
StrcQ8VIM6 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
StrcQ8VIM6 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
StrcQ8VIM6 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
StrcQ8VIM6 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.2□□□□□ -0.3
StrcQ8VIM6 Gm45663-201ENSMUST00000210429 1632 ntBASIC13.2□□□□□ -0.3
StrcQ8VIM6 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
StrcQ8VIM6 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
StrcQ8VIM6 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
StrcQ8VIM6 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
StrcQ8VIM6 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
StrcQ8VIM6 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
StrcQ8VIM6 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC13.2□□□□□ -0.3
StrcQ8VIM6 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
StrcQ8VIM6 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
StrcQ8VIM6 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC13.2□□□□□ -0.3
StrcQ8VIM6 Gm2663-201ENSMUST00000166306 862 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
StrcQ8VIM6 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
StrcQ8VIM6 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
StrcQ8VIM6 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC13.2□□□□□ -0.3
StrcQ8VIM6 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
StrcQ8VIM6 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
StrcQ8VIM6 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
StrcQ8VIM6 Gm42651-201ENSMUST00000199851 1339 ntBASIC13.2□□□□□ -0.3
StrcQ8VIM6 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
StrcQ8VIM6 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
StrcQ8VIM6 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
StrcQ8VIM6 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
StrcQ8VIM6 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
StrcQ8VIM6 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC13.19□□□□□ -0.3
StrcQ8VIM6 Bgn-207ENSMUST00000169489 1574 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
StrcQ8VIM6 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms