Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nup35Q8R4R6 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Gm45199-201ENSMUST00000207640 1507 ntBASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Gm11930-201ENSMUST00000117788 190 ntBASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Gm11793-201ENSMUST00000120433 981 ntBASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Gm26047-201ENSMUST00000157308 113 ntBASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Gm37597-201ENSMUST00000191853 382 ntBASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Gm26047-202ENSMUST00000198840 115 ntBASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Gm42629-201ENSMUST00000199063 1102 ntBASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Gm45691-201ENSMUST00000206905 1120 ntBASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Gm6653-201ENSMUST00000218063 1288 ntBASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Gzmn-202ENSMUST00000225535 989 ntBASIC9.26□□□□□ -0.93
Nup35Q8R4R6 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Gm12799-201ENSMUST00000118151 2560 ntBASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Nup35Q8R4R6 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Gm10829-201ENSMUST00000202084 2988 ntBASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Gm37748-201ENSMUST00000194379 1140 ntBASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Gm19309-201ENSMUST00000218295 205 ntBASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Nup35Q8R4R6 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC9.25□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms