Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 n-R5s64-201ENSMUST00000102019 119 ntBASIC10.74□□□□□ -0.69
Clrn1Q8K445 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC10.74□□□□□ -0.69
Clrn1Q8K445 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC10.74□□□□□ -0.69
Clrn1Q8K445 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC10.74□□□□□ -0.69
Clrn1Q8K445 B9d1os-201ENSMUST00000137010 674 ntBASIC10.74□□□□□ -0.69
Clrn1Q8K445 Gm10051-201ENSMUST00000145209 414 ntBASIC10.74□□□□□ -0.69
Clrn1Q8K445 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Clrn1Q8K445 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Clrn1Q8K445 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clrn1Q8K445 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clrn1Q8K445 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.74□□□□□ -0.69
Clrn1Q8K445 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Clrn1Q8K445 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Clrn1Q8K445 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.74□□□□□ -0.69
Clrn1Q8K445 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC10.74□□□□□ -0.69
Clrn1Q8K445 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC10.74□□□□□ -0.69
Clrn1Q8K445 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Clrn1Q8K445 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clrn1Q8K445 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Clrn1Q8K445 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clrn1Q8K445 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Clrn1Q8K445 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clrn1Q8K445 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Clrn1Q8K445 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clrn1Q8K445 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.74□□□□□ -0.69
Clrn1Q8K445 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clrn1Q8K445 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.74□□□□□ -0.69
Clrn1Q8K445 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clrn1Q8K445 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Clrn1Q8K445 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Clrn1Q8K445 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.74□□□□□ -0.69
Clrn1Q8K445 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clrn1Q8K445 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clrn1Q8K445 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clrn1Q8K445 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clrn1Q8K445 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Clrn1Q8K445 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Clrn1Q8K445 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clrn1Q8K445 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clrn1Q8K445 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Clrn1Q8K445 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Gm18198-201ENSMUST00000204986 1551 ntBASIC10.73□□□□□ -0.69
Clrn1Q8K445 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.73□□□□□ -0.69
Clrn1Q8K445 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Gm13045-201ENSMUST00000119019 712 ntBASIC10.73□□□□□ -0.69
Clrn1Q8K445 Gm15432-201ENSMUST00000121106 195 ntBASIC10.73□□□□□ -0.69
Clrn1Q8K445 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Gm7666-201ENSMUST00000146631 819 ntBASIC10.73□□□□□ -0.69
Clrn1Q8K445 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC10.73□□□□□ -0.69
Clrn1Q8K445 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Clrn1Q8K445 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Gm7741-201ENSMUST00000181445 989 ntBASIC10.73□□□□□ -0.69
Clrn1Q8K445 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Mir7686-201ENSMUST00000200604 57 ntBASIC10.73□□□□□ -0.69
Clrn1Q8K445 Gm43852-201ENSMUST00000202098 917 ntBASIC10.73□□□□□ -0.69
Clrn1Q8K445 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Gm2517-201ENSMUST00000215651 348 ntBASIC10.73□□□□□ -0.69
Clrn1Q8K445 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.73□□□□□ -0.69
Clrn1Q8K445 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.73□□□□□ -0.69
Clrn1Q8K445 AC154290.1-201ENSMUST00000223786 1240 ntBASIC10.73□□□□□ -0.69
Clrn1Q8K445 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Clrn1Q8K445 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Clrn1Q8K445 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms