Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 Gm37422-201ENSMUST00000193794 4718 ntBASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 Gm12266-201ENSMUST00000120311 962 ntBASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 Gm18212-201ENSMUST00000211678 889 ntBASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 Gm6722-201ENSMUST00000221586 390 ntBASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cchcr1Q8K2I2 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cchcr1Q8K2I2 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cchcr1Q8K2I2 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cchcr1Q8K2I2 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cchcr1Q8K2I2 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Cchcr1Q8K2I2 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Cchcr1Q8K2I2 Gm28424-201ENSMUST00000187393 1319 ntBASIC13.46□□□□□ -0.25
Cchcr1Q8K2I2 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Cchcr1Q8K2I2 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cchcr1Q8K2I2 Gm45206-201ENSMUST00000206885 2285 ntBASIC13.46□□□□□ -0.25
Cchcr1Q8K2I2 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cchcr1Q8K2I2 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cchcr1Q8K2I2 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cchcr1Q8K2I2 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cchcr1Q8K2I2 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cchcr1Q8K2I2 Gm12247-201ENSMUST00000117585 670 ntBASIC13.46□□□□□ -0.25
Cchcr1Q8K2I2 Gm12579-201ENSMUST00000118040 783 ntBASIC13.46□□□□□ -0.25
Cchcr1Q8K2I2 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC13.46□□□□□ -0.25
Cchcr1Q8K2I2 Gm13461-201ENSMUST00000120980 662 ntBASIC13.46□□□□□ -0.25
Cchcr1Q8K2I2 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC13.46□□□□□ -0.25
Cchcr1Q8K2I2 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cchcr1Q8K2I2 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC13.46□□□□□ -0.25
Cchcr1Q8K2I2 Gm33366-201ENSMUST00000195583 3827 ntBASIC13.46□□□□□ -0.25
Cchcr1Q8K2I2 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.46□□□□□ -0.25
Cchcr1Q8K2I2 Gm42867-201ENSMUST00000202995 469 ntBASIC13.46□□□□□ -0.25
Cchcr1Q8K2I2 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.46□□□□□ -0.25
Cchcr1Q8K2I2 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Cchcr1Q8K2I2 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cchcr1Q8K2I2 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cchcr1Q8K2I2 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cchcr1Q8K2I2 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cchcr1Q8K2I2 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cchcr1Q8K2I2 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.26
Cchcr1Q8K2I2 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cchcr1Q8K2I2 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Gm8199-201ENSMUST00000121323 823 ntBASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Gm17040-202ENSMUST00000170597 889 ntBASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Gm9353-201ENSMUST00000200472 604 ntBASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Gm40377-201ENSMUST00000204604 2015 ntBASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms