Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Gm23085-201ENSMUST00000157849 293 ntBASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Gm2553-201ENSMUST00000215986 605 ntBASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Gm10254-201ENSMUST00000052888 867 ntBASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cpsf4Q8BQZ5 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Gm24891-201ENSMUST00000104391 136 ntBASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Gm13611-201ENSMUST00000118269 318 ntBASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Gm38117-201ENSMUST00000194653 939 ntBASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Ntng1-201ENSMUST00000051253 327 ntBASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cpsf4Q8BQZ5 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cpsf4Q8BQZ5 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms