Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Gm13916-201ENSMUST00000117368 628 ntBASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Gm8731-201ENSMUST00000118088 412 ntBASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Gm15595-201ENSMUST00000120840 961 ntBASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Gm13263-201ENSMUST00000121271 838 ntBASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Gm17134-201ENSMUST00000166593 437 ntTSL 5 BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Gm27341-201ENSMUST00000183570 106 ntBASIC11.2□□□□□ -0.62
Ccdc116Q80X53 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.2□□□□□ -0.62
Ccdc116Q80X53 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccdc116Q80X53 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Gm2383-201ENSMUST00000181461 807 ntBASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Gm18212-201ENSMUST00000211678 889 ntBASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Gm6722-201ENSMUST00000221586 390 ntBASIC11.19□□□□□ -0.62
Ccdc116Q80X53 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.19□□□□□ -0.62
Ccdc116Q80X53 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ccdc116Q80X53 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms