Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Ush1gQ80T11 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ush1gQ80T11 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.51□□□□□ -0.41
Ush1gQ80T11 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ush1gQ80T11 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ush1gQ80T11 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ush1gQ80T11 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ush1gQ80T11 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ush1gQ80T11 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ush1gQ80T11 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ush1gQ80T11 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.5□□□□□ -0.41
Ush1gQ80T11 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ush1gQ80T11 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ush1gQ80T11 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ush1gQ80T11 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ush1gQ80T11 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.5□□□□□ -0.41
Ush1gQ80T11 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ush1gQ80T11 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ush1gQ80T11 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ush1gQ80T11 Gm22146-201ENSMUST00000157397 288 ntBASIC12.5□□□□□ -0.41
Ush1gQ80T11 Gm22379-201ENSMUST00000157480 131 ntBASIC12.5□□□□□ -0.41
Ush1gQ80T11 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.5□□□□□ -0.41
Ush1gQ80T11 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ush1gQ80T11 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.5□□□□□ -0.41
Ush1gQ80T11 Gm37826-201ENSMUST00000195329 322 ntBASIC12.5□□□□□ -0.41
Ush1gQ80T11 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.5□□□□□ -0.41
Ush1gQ80T11 Gm18561-201ENSMUST00000206027 804 ntBASIC12.5□□□□□ -0.41
Ush1gQ80T11 Gm18460-201ENSMUST00000208088 464 ntBASIC12.5□□□□□ -0.41
Ush1gQ80T11 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.5□□□□□ -0.41
Ush1gQ80T11 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ush1gQ80T11 Gm4978-201ENSMUST00000071565 801 ntBASIC12.5□□□□□ -0.41
Ush1gQ80T11 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ush1gQ80T11 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ush1gQ80T11 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ush1gQ80T11 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ush1gQ80T11 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Ush1gQ80T11 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ush1gQ80T11 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.5□□□□□ -0.41
Ush1gQ80T11 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ush1gQ80T11 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.5□□□□□ -0.41
Ush1gQ80T11 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ush1gQ80T11 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ush1gQ80T11 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ush1gQ80T11 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ush1gQ80T11 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ush1gQ80T11 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ush1gQ80T11 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ush1gQ80T11 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.5□□□□□ -0.41
Ush1gQ80T11 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ush1gQ80T11 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.5□□□□□ -0.41
Ush1gQ80T11 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ush1gQ80T11 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ush1gQ80T11 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ush1gQ80T11 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ush1gQ80T11 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ush1gQ80T11 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Ush1gQ80T11 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ush1gQ80T11 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ush1gQ80T11 Gm14071-201ENSMUST00000117817 509 ntBASIC12.49□□□□□ -0.41
Ush1gQ80T11 Gm25545-201ENSMUST00000122673 323 ntBASIC12.49□□□□□ -0.41
Ush1gQ80T11 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ush1gQ80T11 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.49□□□□□ -0.41
Ush1gQ80T11 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ush1gQ80T11 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ush1gQ80T11 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Ush1gQ80T11 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ush1gQ80T11 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ush1gQ80T11 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.49□□□□□ -0.41
Ush1gQ80T11 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.49□□□□□ -0.41
Ush1gQ80T11 CT009527.1-201ENSMUST00000224205 339 ntBASIC12.49□□□□□ -0.41
Ush1gQ80T11 AC154361.2-201ENSMUST00000224747 943 ntBASIC12.49□□□□□ -0.41
Ush1gQ80T11 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ush1gQ80T11 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ush1gQ80T11 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ush1gQ80T11 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ush1gQ80T11 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ush1gQ80T11 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ush1gQ80T11 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ush1gQ80T11 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ush1gQ80T11 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ush1gQ80T11 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.49□□□□□ -0.41
Ush1gQ80T11 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ush1gQ80T11 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ush1gQ80T11 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ush1gQ80T11 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ush1gQ80T11 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ush1gQ80T11 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ush1gQ80T11 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ush1gQ80T11 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ush1gQ80T11 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ush1gQ80T11 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ush1gQ80T11 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ush1gQ80T11 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ush1gQ80T11 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ush1gQ80T11 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.48□□□□□ -0.41
Ush1gQ80T11 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ush1gQ80T11 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ush1gQ80T11 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ush1gQ80T11 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ush1gQ80T11 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms