Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Smchd1Q6P5D8 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smchd1Q6P5D8 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC12.43□□□□□ -0.42
Smchd1Q6P5D8 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Smchd1Q6P5D8 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.43□□□□□ -0.42
Smchd1Q6P5D8 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Smchd1Q6P5D8 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smchd1Q6P5D8 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smchd1Q6P5D8 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Smchd1Q6P5D8 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smchd1Q6P5D8 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Gm17070-201ENSMUST00000170463 784 ntBASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Gm28833-201ENSMUST00000189671 559 ntBASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 n-R5s211-201ENSMUST00000093689 119 ntBASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Gm5621-201ENSMUST00000187303 640 ntBASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Gm43249-201ENSMUST00000200464 458 ntBASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 AC149588.2-201ENSMUST00000228182 1859 ntBASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Mir483-201ENSMUST00000093631 73 ntBASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smchd1Q6P5D8 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 Gm15003-201ENSMUST00000118884 446 ntBASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 Gm20414-201ENSMUST00000172918 646 ntBASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 Gm26670-202ENSMUST00000226862 340 ntBASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 Gm37651-201ENSMUST00000194679 1494 ntBASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smchd1Q6P5D8 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms