Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 AC166359.1-201ENSMUST00000220243 1871 ntBASIC8.81□□□□□ -1
Foxc1Q61572 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Foxc1Q61572 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Foxc1Q61572 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Foxc1Q61572 AC124433.1-202ENSMUST00000224762 1535 ntBASIC8.81□□□□□ -1
Foxc1Q61572 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Foxc1Q61572 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Foxc1Q61572 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC8.81□□□□□ -1
Foxc1Q61572 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Foxc1Q61572 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Foxc1Q61572 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Foxc1Q61572 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Foxc1Q61572 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Foxc1Q61572 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC8.81□□□□□ -1
Foxc1Q61572 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC8.81□□□□□ -1
Foxc1Q61572 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC8.81□□□□□ -1
Foxc1Q61572 Gm14109-201ENSMUST00000118814 309 ntBASIC8.81□□□□□ -1
Foxc1Q61572 Gm12286-201ENSMUST00000119246 1002 ntBASIC8.81□□□□□ -1
Foxc1Q61572 Gm14832-201ENSMUST00000121289 322 ntBASIC8.81□□□□□ -1
Foxc1Q61572 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC8.81□□□□□ -1
Foxc1Q61572 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Foxc1Q61572 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC8.81□□□□□ -1
Foxc1Q61572 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Foxc1Q61572 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC8.81□□□□□ -1
Foxc1Q61572 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Foxc1Q61572 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Foxc1Q61572 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Foxc1Q61572 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Foxc1Q61572 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Foxc1Q61572 Gm16505-201ENSMUST00000179981 232 ntBASIC8.81□□□□□ -1
Foxc1Q61572 Scgb1b25-ps-201ENSMUST00000186419 415 ntBASIC8.81□□□□□ -1
Foxc1Q61572 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC8.81□□□□□ -1
Foxc1Q61572 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC8.81□□□□□ -1
Foxc1Q61572 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC8.81□□□□□ -1
Foxc1Q61572 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC8.81□□□□□ -1
Foxc1Q61572 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC8.81□□□□□ -1
Foxc1Q61572 Gm21049-201ENSMUST00000197078 987 ntBASIC8.81□□□□□ -1
Foxc1Q61572 Gm44422-201ENSMUST00000204142 1025 ntBASIC8.81□□□□□ -1
Foxc1Q61572 AC167202.1-201ENSMUST00000219027 331 ntBASIC8.81□□□□□ -1
Foxc1Q61572 Gm3333-202ENSMUST00000221763 1044 ntBASIC8.81□□□□□ -1
Foxc1Q61572 CU024892.1-201ENSMUST00000224869 515 ntBASIC8.81□□□□□ -1
Foxc1Q61572 AV026068-225ENSMUST00000225042 490 ntBASIC8.81□□□□□ -1
Foxc1Q61572 AC113031.8-201ENSMUST00000227856 631 ntBASIC8.81□□□□□ -1
Foxc1Q61572 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Foxc1Q61572 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Foxc1Q61572 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Foxc1Q61572 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Foxc1Q61572 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Foxc1Q61572 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC8.81□□□□□ -1
Foxc1Q61572 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC8.81□□□□□ -1
Foxc1Q61572 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Foxc1Q61572 Gm42852-201ENSMUST00000202649 1379 ntBASIC8.81□□□□□ -1
Foxc1Q61572 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Foxc1Q61572 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Foxc1Q61572 Gm5884-201ENSMUST00000036712 1479 ntBASIC8.81□□□□□ -1
Foxc1Q61572 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Foxc1Q61572 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC8.81□□□□□ -1
Foxc1Q61572 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Foxc1Q61572 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC8.81□□□□□ -1
Foxc1Q61572 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Foxc1Q61572 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC8.81□□□□□ -1
Foxc1Q61572 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Foxc1Q61572 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Foxc1Q61572 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Foxc1Q61572 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC8.81□□□□□ -1
Foxc1Q61572 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC8.81□□□□□ -1
Foxc1Q61572 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Foxc1Q61572 Gm44913-201ENSMUST00000208060 2990 ntBASIC8.81□□□□□ -1
Foxc1Q61572 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Foxc1Q61572 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Foxc1Q61572 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC8.81□□□□□ -1
Foxc1Q61572 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Foxc1Q61572 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Foxc1Q61572 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Foxc1Q61572 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Foxc1Q61572 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC8.8□□□□□ -1
Foxc1Q61572 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Foxc1Q61572 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Foxc1Q61572 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC8.8□□□□□ -1
Foxc1Q61572 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC8.8□□□□□ -1
Foxc1Q61572 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC8.8□□□□□ -1
Foxc1Q61572 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Foxc1Q61572 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Foxc1Q61572 Gm24934-201ENSMUST00000103764 111 ntBASIC8.8□□□□□ -1
Foxc1Q61572 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC8.8□□□□□ -1
Foxc1Q61572 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms