Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ift88Q61371 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ift88Q61371 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ift88Q61371 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Ift88Q61371 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.59□□□□□ -0.39
Ift88Q61371 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ift88Q61371 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ift88Q61371 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ift88Q61371 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Ift88Q61371 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ift88Q61371 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ift88Q61371 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ift88Q61371 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ift88Q61371 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Ift88Q61371 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ift88Q61371 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ift88Q61371 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Ift88Q61371 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ift88Q61371 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Ift88Q61371 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ift88Q61371 Gm23596-201ENSMUST00000104304 132 ntBASIC12.58□□□□□ -0.4
Ift88Q61371 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.58□□□□□ -0.4
Ift88Q61371 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.58□□□□□ -0.4
Ift88Q61371 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.58□□□□□ -0.4
Ift88Q61371 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ift88Q61371 Gm8815-201ENSMUST00000173809 620 ntBASIC12.58□□□□□ -0.4
Ift88Q61371 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ift88Q61371 Gm37666-201ENSMUST00000194110 866 ntBASIC12.58□□□□□ -0.4
Ift88Q61371 Gm5714-201ENSMUST00000197343 566 ntBASIC12.58□□□□□ -0.4
Ift88Q61371 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.58□□□□□ -0.4
Ift88Q61371 Gm45433-201ENSMUST00000209386 247 ntBASIC12.58□□□□□ -0.4
Ift88Q61371 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.58□□□□□ -0.4
Ift88Q61371 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ift88Q61371 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ift88Q61371 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ift88Q61371 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ift88Q61371 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ift88Q61371 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ift88Q61371 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ift88Q61371 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ift88Q61371 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ift88Q61371 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.58□□□□□ -0.4
Ift88Q61371 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ift88Q61371 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ift88Q61371 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ift88Q61371 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ift88Q61371 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ift88Q61371 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ift88Q61371 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ift88Q61371 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ift88Q61371 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ift88Q61371 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ift88Q61371 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.57□□□□□ -0.4
Ift88Q61371 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ift88Q61371 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ift88Q61371 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ift88Q61371 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ift88Q61371 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ift88Q61371 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ift88Q61371 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ift88Q61371 Gm22323-201ENSMUST00000103832 109 ntBASIC12.57□□□□□ -0.4
Ift88Q61371 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.57□□□□□ -0.4
Ift88Q61371 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC12.57□□□□□ -0.4
Ift88Q61371 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ift88Q61371 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ift88Q61371 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ift88Q61371 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Ift88Q61371 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ift88Q61371 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Ift88Q61371 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.57□□□□□ -0.4
Ift88Q61371 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ift88Q61371 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.57□□□□□ -0.4
Ift88Q61371 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.57□□□□□ -0.4
Ift88Q61371 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.57□□□□□ -0.4
Ift88Q61371 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ift88Q61371 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ift88Q61371 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ift88Q61371 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.57□□□□□ -0.4
Ift88Q61371 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ift88Q61371 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ift88Q61371 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ift88Q61371 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ift88Q61371 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ift88Q61371 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ift88Q61371 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ift88Q61371 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ift88Q61371 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ift88Q61371 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ift88Q61371 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Ift88Q61371 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ift88Q61371 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC12.56□□□□□ -0.4
Ift88Q61371 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ift88Q61371 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ift88Q61371 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ift88Q61371 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC12.56□□□□□ -0.4
Ift88Q61371 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.56□□□□□ -0.4
Ift88Q61371 Gm23949-201ENSMUST00000104027 127 ntBASIC12.56□□□□□ -0.4
Ift88Q61371 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ift88Q61371 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.56□□□□□ -0.4
Ift88Q61371 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms