Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Gm43984-201ENSMUST00000204572 2864 ntBASIC14.17□□□□□ -0.14
Usp48Q3V0C5 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp48Q3V0C5 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC14.17□□□□□ -0.14
Usp48Q3V0C5 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp48Q3V0C5 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp48Q3V0C5 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp48Q3V0C5 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usp48Q3V0C5 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Usp48Q3V0C5 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usp48Q3V0C5 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp48Q3V0C5 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp48Q3V0C5 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp48Q3V0C5 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp48Q3V0C5 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp48Q3V0C5 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp48Q3V0C5 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp48Q3V0C5 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC14.16□□□□□ -0.14
Usp48Q3V0C5 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp48Q3V0C5 Gm15615-201ENSMUST00000118876 198 ntBASIC14.16□□□□□ -0.14
Usp48Q3V0C5 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC14.16□□□□□ -0.14
Usp48Q3V0C5 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp48Q3V0C5 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC14.16□□□□□ -0.14
Usp48Q3V0C5 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp48Q3V0C5 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC14.16□□□□□ -0.14
Usp48Q3V0C5 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC14.16□□□□□ -0.14
Usp48Q3V0C5 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC14.16□□□□□ -0.14
Usp48Q3V0C5 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC14.16□□□□□ -0.14
Usp48Q3V0C5 Gm42433-201ENSMUST00000196806 940 ntBASIC14.16□□□□□ -0.14
Usp48Q3V0C5 Gm43275-201ENSMUST00000202053 1020 ntBASIC14.16□□□□□ -0.14
Usp48Q3V0C5 Gm6423-201ENSMUST00000204315 934 ntBASIC14.16□□□□□ -0.14
Usp48Q3V0C5 Gm45135-201ENSMUST00000206787 1184 ntBASIC14.16□□□□□ -0.14
Usp48Q3V0C5 Gm45527-201ENSMUST00000211052 774 ntBASIC14.16□□□□□ -0.14
Usp48Q3V0C5 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC14.16□□□□□ -0.14
Usp48Q3V0C5 Olfr692-202ENSMUST00000217827 1126 ntBASIC14.16□□□□□ -0.14
Usp48Q3V0C5 AC112945.1-201ENSMUST00000226413 514 ntBASIC14.16□□□□□ -0.14
Usp48Q3V0C5 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp48Q3V0C5 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp48Q3V0C5 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Usp48Q3V0C5 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp48Q3V0C5 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp48Q3V0C5 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Usp48Q3V0C5 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp48Q3V0C5 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usp48Q3V0C5 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp48Q3V0C5 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC14.16□□□□□ -0.14
Usp48Q3V0C5 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Usp48Q3V0C5 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp48Q3V0C5 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Gm37131-201ENSMUST00000192502 1561 ntBASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Gm9089-201ENSMUST00000122027 526 ntBASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp48Q3V0C5 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Gm20414-201ENSMUST00000172918 646 ntBASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Mir6941-201ENSMUST00000184711 59 ntBASIC14.15□□□□□ -0.14
Usp48Q3V0C5 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Gm9136-201ENSMUST00000193368 454 ntBASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Gm9884-201ENSMUST00000194343 1222 ntBASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Gm38151-201ENSMUST00000195085 289 ntBASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Gm4811-201ENSMUST00000220879 1220 ntBASIC14.15□□□□□ -0.14
Usp48Q3V0C5 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Gm23105-201ENSMUST00000083719 134 ntBASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Gm4900-201ENSMUST00000222046 1628 ntBASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp48Q3V0C5 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC14.15□□□□□ -0.15
Usp48Q3V0C5 Gm42913-201ENSMUST00000197936 1853 ntBASIC14.14□□□□□ -0.15
Usp48Q3V0C5 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp48Q3V0C5 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp48Q3V0C5 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp48Q3V0C5 AC126257.2-201ENSMUST00000215507 2300 ntBASIC14.14□□□□□ -0.15
Usp48Q3V0C5 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp48Q3V0C5 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp48Q3V0C5 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp48Q3V0C5 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp48Q3V0C5 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp48Q3V0C5 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms