Protein–RNA interactions for Protein: Q3V079

Bbof1, Basal body-orientation factor 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bbof1Q3V079 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Bbof1Q3V079 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.54□□□□□ -0.4
Bbof1Q3V079 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.54□□□□□ -0.4
Bbof1Q3V079 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Bbof1Q3V079 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Bbof1Q3V079 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Bbof1Q3V079 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Bbof1Q3V079 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Bbof1Q3V079 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Bbof1Q3V079 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Bbof1Q3V079 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.53□□□□□ -0.4
Bbof1Q3V079 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.53□□□□□ -0.4
Bbof1Q3V079 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.53□□□□□ -0.4
Bbof1Q3V079 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Bbof1Q3V079 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Bbof1Q3V079 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.53□□□□□ -0.4
Bbof1Q3V079 Gm9062-201ENSMUST00000117712 727 ntBASIC12.53□□□□□ -0.4
Bbof1Q3V079 Gm13461-201ENSMUST00000120980 662 ntBASIC12.53□□□□□ -0.4
Bbof1Q3V079 Gm8199-201ENSMUST00000121323 823 ntBASIC12.53□□□□□ -0.4
Bbof1Q3V079 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.53□□□□□ -0.4
Bbof1Q3V079 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.53□□□□□ -0.4
Bbof1Q3V079 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Bbof1Q3V079 Gm9192-201ENSMUST00000183221 985 ntBASIC12.53□□□□□ -0.4
Bbof1Q3V079 Gm5733-201ENSMUST00000190232 939 ntBASIC12.53□□□□□ -0.4
Bbof1Q3V079 Gm6450-201ENSMUST00000200896 574 ntBASIC12.53□□□□□ -0.4
Bbof1Q3V079 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
Bbof1Q3V079 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.53□□□□□ -0.4
Bbof1Q3V079 Spcs1-203ENSMUST00000226374 592 ntBASIC12.53□□□□□ -0.4
Bbof1Q3V079 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.53□□□□□ -0.4
Bbof1Q3V079 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Bbof1Q3V079 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Bbof1Q3V079 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Bbof1Q3V079 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Bbof1Q3V079 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Bbof1Q3V079 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Bbof1Q3V079 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Bbof1Q3V079 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Bbof1Q3V079 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Bbof1Q3V079 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Bbof1Q3V079 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Bbof1Q3V079 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Bbof1Q3V079 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Bbof1Q3V079 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Bbof1Q3V079 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Bbof1Q3V079 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Bbof1Q3V079 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Bbof1Q3V079 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Bbof1Q3V079 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Bbof1Q3V079 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Bbof1Q3V079 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Bbof1Q3V079 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Bbof1Q3V079 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Bbof1Q3V079 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Bbof1Q3V079 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Bbof1Q3V079 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Bbof1Q3V079 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.52□□□□□ -0.41
Bbof1Q3V079 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Bbof1Q3V079 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Bbof1Q3V079 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Bbof1Q3V079 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Bbof1Q3V079 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Bbof1Q3V079 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Bbof1Q3V079 Gm13263-201ENSMUST00000121271 838 ntBASIC12.52□□□□□ -0.41
Bbof1Q3V079 B9d1os-201ENSMUST00000137010 674 ntBASIC12.52□□□□□ -0.41
Bbof1Q3V079 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.52□□□□□ -0.41
Bbof1Q3V079 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.52□□□□□ -0.41
Bbof1Q3V079 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.52□□□□□ -0.41
Bbof1Q3V079 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Bbof1Q3V079 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Bbof1Q3V079 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Bbof1Q3V079 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Bbof1Q3V079 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.52□□□□□ -0.41
Bbof1Q3V079 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Bbof1Q3V079 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Bbof1Q3V079 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Bbof1Q3V079 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Bbof1Q3V079 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Bbof1Q3V079 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Bbof1Q3V079 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Bbof1Q3V079 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Bbof1Q3V079 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Bbof1Q3V079 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Bbof1Q3V079 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Bbof1Q3V079 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Bbof1Q3V079 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Bbof1Q3V079 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Bbof1Q3V079 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Bbof1Q3V079 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.51□□□□□ -0.41
Bbof1Q3V079 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Bbof1Q3V079 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Bbof1Q3V079 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Bbof1Q3V079 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Bbof1Q3V079 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Bbof1Q3V079 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Bbof1Q3V079 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Bbof1Q3V079 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Bbof1Q3V079 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Bbof1Q3V079 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.51□□□□□ -0.41
Bbof1Q3V079 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Bbof1Q3V079 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms