Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Mup-ps29-201ENSMUST00000122281 202 ntBASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Gm22846-201ENSMUST00000157706 270 ntBASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Mir1943-201ENSMUST00000158276 73 ntBASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Mir7051-201ENSMUST00000184167 73 ntBASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Gm3551-201ENSMUST00000190750 664 ntBASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Gm42997-202ENSMUST00000200321 985 ntBASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Gm42867-201ENSMUST00000202995 469 ntBASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Gm45398-201ENSMUST00000210561 165 ntBASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 CT485606.1-201ENSMUST00000213187 878 ntBASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 AC115122.1-201ENSMUST00000224850 1040 ntBASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Gm14267-206ENSMUST00000226870 1209 ntBASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 CT030637.1-201ENSMUST00000228016 669 ntBASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nhlrc4Q3UP44 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Gm16219-201ENSMUST00000120096 274 ntBASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Gm37284-201ENSMUST00000193607 539 ntBASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Gm43520-201ENSMUST00000197996 164 ntBASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Gm43947-201ENSMUST00000203019 959 ntBASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Gm44421-201ENSMUST00000205064 1221 ntBASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nhlrc4Q3UP44 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms