Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Nlrc4Q3UP24 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.02□□□□□ -0.48
Nlrc4Q3UP24 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nlrc4Q3UP24 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.02□□□□□ -0.48
Nlrc4Q3UP24 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.02□□□□□ -0.48
Nlrc4Q3UP24 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Nlrc4Q3UP24 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Nlrc4Q3UP24 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Nlrc4Q3UP24 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nlrc4Q3UP24 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nlrc4Q3UP24 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nlrc4Q3UP24 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Nlrc4Q3UP24 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nlrc4Q3UP24 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nlrc4Q3UP24 Gm15617-201ENSMUST00000118973 771 ntBASIC12.02□□□□□ -0.49
Nlrc4Q3UP24 Gm14942-201ENSMUST00000119642 336 ntBASIC12.02□□□□□ -0.49
Nlrc4Q3UP24 Gm11246-201ENSMUST00000120880 345 ntBASIC12.02□□□□□ -0.49
Nlrc4Q3UP24 Gm23694-201ENSMUST00000179335 110 ntBASIC12.02□□□□□ -0.49
Nlrc4Q3UP24 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nlrc4Q3UP24 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.02□□□□□ -0.49
Nlrc4Q3UP24 Gm9463-201ENSMUST00000206707 601 ntBASIC12.02□□□□□ -0.49
Nlrc4Q3UP24 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.02□□□□□ -0.49
Nlrc4Q3UP24 Gm8285-201ENSMUST00000208293 759 ntBASIC12.02□□□□□ -0.49
Nlrc4Q3UP24 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nlrc4Q3UP24 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.02□□□□□ -0.49
Nlrc4Q3UP24 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Nlrc4Q3UP24 Gm10179-201ENSMUST00000086233 688 ntBASIC12.02□□□□□ -0.49
Nlrc4Q3UP24 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nlrc4Q3UP24 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nlrc4Q3UP24 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Nlrc4Q3UP24 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC12.02□□□□□ -0.49
Nlrc4Q3UP24 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.02□□□□□ -0.49
Nlrc4Q3UP24 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nlrc4Q3UP24 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nlrc4Q3UP24 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nlrc4Q3UP24 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nlrc4Q3UP24 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nlrc4Q3UP24 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nlrc4Q3UP24 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nlrc4Q3UP24 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Nlrc4Q3UP24 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Nlrc4Q3UP24 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nlrc4Q3UP24 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 AC124433.1-202ENSMUST00000224762 1535 ntBASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 Gm27910-201ENSMUST00000185004 107 ntBASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 Gm29067-201ENSMUST00000190821 470 ntBASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nlrc4Q3UP24 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Gm17230-201ENSMUST00000171194 3942 ntBASIC12□□□□□ -0.49
Nlrc4Q3UP24 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nlrc4Q3UP24 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms