Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Gm8606-201ENSMUST00000121482 888 ntBASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Gm22915-201ENSMUST00000157615 136 ntBASIC5.8□□□□□ -1.48
Ush2AQ2QI47 1700021F13Rik-202ENSMUST00000202665 469 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Higd1a-202ENSMUST00000213124 713 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Olfr1393-201ENSMUST00000078932 936 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Npm1-202ENSMUST00000093201 1192 ntTSL 5 BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Gm9947-201ENSMUST00000067599 2920 ntBASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Gm10531-201ENSMUST00000193527 2303 ntBASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Prim1-201ENSMUST00000026461 1583 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 4930455D15Rik-201ENSMUST00000181632 1616 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Gm14735-201ENSMUST00000121772 3088 ntBASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Igkv14-130-201ENSMUST00000103307 350 ntAPPRIS ALT2 BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Ighv2-2-201ENSMUST00000103443 352 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Cox4i2-202ENSMUST00000109821 733 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Ccdc141-203ENSMUST00000111833 631 ntTSL 2 BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Gm11707-201ENSMUST00000150366 490 ntTSL 3 BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 D330041H03Rik-203ENSMUST00000180579 605 ntTSL 5 BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Gm44778-201ENSMUST00000206447 668 ntTSL 3 BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 A930033M14Rik-201ENSMUST00000217206 400 ntBASIC5.8□□□□□ -1.48
Ush2AQ2QI47 1700029N11Rik-203ENSMUST00000220639 1092 ntTSL 5 BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Fkbp3-202ENSMUST00000220730 579 ntTSL 5 BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 AC116797.2-203ENSMUST00000225290 565 ntBASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Gm6460-201ENSMUST00000088616 1168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Atf7-201ENSMUST00000096143 390 ntBASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 AC154747.3-201ENSMUST00000224471 3470 ntBASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Gm44942-201ENSMUST00000096093 2072 ntBASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Gm13120-201ENSMUST00000117343 1446 ntBASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Gm13104-201ENSMUST00000119651 1446 ntBASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Gm14264-201ENSMUST00000147141 1864 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 AC154575.1-201ENSMUST00000227166 1474 ntBASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Asgr1-203ENSMUST00000108585 1169 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Gm9670-201ENSMUST00000121201 540 ntBASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Gm12637-201ENSMUST00000130501 368 ntTSL 3 BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Olfml3-204ENSMUST00000169286 874 ntBASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Gm23927-202ENSMUST00000199928 216 ntBASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Lysmd4-203ENSMUST00000207757 631 ntAPPRIS ALT2 TSL 3 BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Mif-201ENSMUST00000038169 544 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Aadacl4-201ENSMUST00000094510 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Ucn3-201ENSMUST00000058610 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Rps27a-201ENSMUST00000102844 637 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Gm13655-201ENSMUST00000119695 745 ntBASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Gm22711-202ENSMUST00000197029 135 ntBASIC5.79□□□□□ -1.48
Ush2AQ2QI47 AC107369.2-201ENSMUST00000226154 916 ntBASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Gm37912-201ENSMUST00000191895 3076 ntBASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Gm44851-201ENSMUST00000205735 2309 ntBASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Cass4-204ENSMUST00000228775 2629 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 AC130671.3-201ENSMUST00000227393 1897 ntBASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Chrne-202ENSMUST00000102556 1591 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Igkv4-55-201ENSMUST00000103359 379 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Swi5-202ENSMUST00000113395 712 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
Ush2AQ2QI47 Gm12192-201ENSMUST00000120146 487 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms