Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf1Q07802 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.6□□□□□ -0.55
Ebf1Q07802 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf1Q07802 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.6□□□□□ -0.55
Ebf1Q07802 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ebf1Q07802 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.6□□□□□ -0.55
Ebf1Q07802 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.6□□□□□ -0.55
Ebf1Q07802 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ebf1Q07802 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Ebf1Q07802 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.59□□□□□ -0.55
Ebf1Q07802 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Ebf1Q07802 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ebf1Q07802 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.59□□□□□ -0.55
Ebf1Q07802 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Ebf1Q07802 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ebf1Q07802 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.59□□□□□ -0.55
Ebf1Q07802 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ebf1Q07802 Gm15784-201ENSMUST00000120260 1462 ntBASIC11.59□□□□□ -0.55
Ebf1Q07802 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ebf1Q07802 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ebf1Q07802 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.59□□□□□ -0.55
Ebf1Q07802 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ebf1Q07802 Gm12030-201ENSMUST00000121917 223 ntBASIC11.59□□□□□ -0.55
Ebf1Q07802 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.59□□□□□ -0.55
Ebf1Q07802 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC11.59□□□□□ -0.55
Ebf1Q07802 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ebf1Q07802 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC11.59□□□□□ -0.55
Ebf1Q07802 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.59□□□□□ -0.55
Ebf1Q07802 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.59□□□□□ -0.55
Ebf1Q07802 AC159376.1-201ENSMUST00000218504 630 ntBASIC11.59□□□□□ -0.55
Ebf1Q07802 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Ebf1Q07802 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.59□□□□□ -0.55
Ebf1Q07802 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ebf1Q07802 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ebf1Q07802 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Ebf1Q07802 Gm23105-201ENSMUST00000083719 134 ntBASIC11.59□□□□□ -0.55
Ebf1Q07802 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ebf1Q07802 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Ebf1Q07802 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ebf1Q07802 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ebf1Q07802 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ebf1Q07802 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ebf1Q07802 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ebf1Q07802 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Ebf1Q07802 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ebf1Q07802 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ebf1Q07802 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Ebf1Q07802 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ebf1Q07802 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.59□□□□□ -0.55
Ebf1Q07802 Gm43334-201ENSMUST00000197740 1318 ntBASIC11.59□□□□□ -0.55
Ebf1Q07802 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ebf1Q07802 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.59□□□□□ -0.55
Ebf1Q07802 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.59□□□□□ -0.55
Ebf1Q07802 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Ebf1Q07802 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Ebf1Q07802 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.58□□□□□ -0.55
Ebf1Q07802 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Ebf1Q07802 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.58□□□□□ -0.55
Ebf1Q07802 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Ebf1Q07802 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Ebf1Q07802 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ebf1Q07802 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ebf1Q07802 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ebf1Q07802 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ebf1Q07802 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ebf1Q07802 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ebf1Q07802 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC11.58□□□□□ -0.56
Ebf1Q07802 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ebf1Q07802 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ebf1Q07802 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC11.58□□□□□ -0.56
Ebf1Q07802 Gm13117-201ENSMUST00000120894 691 ntBASIC11.58□□□□□ -0.56
Ebf1Q07802 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ebf1Q07802 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ebf1Q07802 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ebf1Q07802 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ebf1Q07802 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.58□□□□□ -0.56
Ebf1Q07802 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.58□□□□□ -0.56
Ebf1Q07802 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.58□□□□□ -0.56
Ebf1Q07802 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.58□□□□□ -0.56
Ebf1Q07802 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.58□□□□□ -0.56
Ebf1Q07802 Gm6722-201ENSMUST00000221586 390 ntBASIC11.58□□□□□ -0.56
Ebf1Q07802 Gm7959-201ENSMUST00000221823 1078 ntBASIC11.58□□□□□ -0.56
Ebf1Q07802 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.58□□□□□ -0.56
Ebf1Q07802 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.58□□□□□ -0.56
Ebf1Q07802 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ebf1Q07802 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ebf1Q07802 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ebf1Q07802 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ebf1Q07802 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ebf1Q07802 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ebf1Q07802 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ebf1Q07802 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ebf1Q07802 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ebf1Q07802 Btrc-209ENSMUST00000224478 2194 ntBASIC11.58□□□□□ -0.56
Ebf1Q07802 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.58□□□□□ -0.56
Ebf1Q07802 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Ebf1Q07802 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Ebf1Q07802 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ebf1Q07802 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ebf1Q07802 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms