Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cacna1sQ02789 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1sQ02789 Gm28391-201ENSMUST00000185202 379 ntBASIC14.1□□□□□ -0.15
Cacna1sQ02789 Gm29528-201ENSMUST00000186699 379 ntBASIC14.1□□□□□ -0.15
Cacna1sQ02789 Gm29526-201ENSMUST00000187217 379 ntBASIC14.1□□□□□ -0.15
Cacna1sQ02789 Ighv5-1-201ENSMUST00000193324 353 ntBASIC14.1□□□□□ -0.15
Cacna1sQ02789 Gm9523-201ENSMUST00000199146 1159 ntBASIC14.1□□□□□ -0.15
Cacna1sQ02789 Gm9515-201ENSMUST00000200276 647 ntBASIC14.1□□□□□ -0.15
Cacna1sQ02789 Gm42803-201ENSMUST00000201051 451 ntBASIC14.1□□□□□ -0.15
Cacna1sQ02789 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1sQ02789 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC14.1□□□□□ -0.15
Cacna1sQ02789 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC14.1□□□□□ -0.15
Cacna1sQ02789 CT025679.1-201ENSMUST00000227106 449 ntBASIC14.1□□□□□ -0.15
Cacna1sQ02789 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC14.1□□□□□ -0.15
Cacna1sQ02789 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1sQ02789 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1sQ02789 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.1□□□□□ -0.15
Cacna1sQ02789 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cacna1sQ02789 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1sQ02789 Gm42651-201ENSMUST00000199851 1339 ntBASIC14.1□□□□□ -0.15
Cacna1sQ02789 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.1□□□□□ -0.15
Cacna1sQ02789 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1sQ02789 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cacna1sQ02789 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC14.1□□□□□ -0.15
Cacna1sQ02789 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1sQ02789 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cacna1sQ02789 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1sQ02789 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC14.1□□□□□ -0.15
Cacna1sQ02789 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1sQ02789 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1sQ02789 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC14.1□□□□□ -0.15
Cacna1sQ02789 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cacna1sQ02789 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1sQ02789 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1sQ02789 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1sQ02789 AC116596.1-201ENSMUST00000228112 1762 ntBASIC14.1□□□□□ -0.15
Cacna1sQ02789 Gm23129-201ENSMUST00000104259 132 ntBASIC14.1□□□□□ -0.15
Cacna1sQ02789 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC14.1□□□□□ -0.15
Cacna1sQ02789 Gm26532-201ENSMUST00000180630 690 ntBASIC14.1□□□□□ -0.15
Cacna1sQ02789 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1sQ02789 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1sQ02789 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cacna1sQ02789 Gm9790-201ENSMUST00000054148 288 ntBASIC14.1□□□□□ -0.15
Cacna1sQ02789 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cacna1sQ02789 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1sQ02789 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Cacna1sQ02789 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1sQ02789 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1sQ02789 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1sQ02789 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1sQ02789 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1sQ02789 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1sQ02789 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1sQ02789 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1sQ02789 Gm6713-201ENSMUST00000216137 1446 ntBASIC14.09□□□□□ -0.15
Cacna1sQ02789 Xaf1-204ENSMUST00000146233 2597 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cacna1sQ02789 Gm45663-201ENSMUST00000210429 1632 ntBASIC14.09□□□□□ -0.15
Cacna1sQ02789 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1sQ02789 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1sQ02789 Mir291b-201ENSMUST00000104838 79 ntBASIC14.09□□□□□ -0.15
Cacna1sQ02789 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1sQ02789 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1sQ02789 H2afy3-201ENSMUST00000151919 1112 ntBASIC14.09□□□□□ -0.15
Cacna1sQ02789 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC14.09□□□□□ -0.15
Cacna1sQ02789 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC14.09□□□□□ -0.15
Cacna1sQ02789 Gm6946-201ENSMUST00000182237 987 ntBASIC14.09□□□□□ -0.15
Cacna1sQ02789 Gm31466-201ENSMUST00000195457 916 ntTSL 3 BASIC14.09□□□□□ -0.15
Cacna1sQ02789 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1sQ02789 Gm39147-202ENSMUST00000211730 882 ntTSL 5 BASIC14.09□□□□□ -0.15
Cacna1sQ02789 AC161172.1-201ENSMUST00000227801 486 ntBASIC14.09□□□□□ -0.15
Cacna1sQ02789 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cacna1sQ02789 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1sQ02789 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1sQ02789 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1sQ02789 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1sQ02789 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1sQ02789 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1sQ02789 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1sQ02789 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Cacna1sQ02789 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cacna1sQ02789 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1sQ02789 Pvalb-202ENSMUST00000120592 953 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1sQ02789 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC14.08□□□□□ -0.16
Cacna1sQ02789 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1sQ02789 Mir3060-201ENSMUST00000175339 83 ntBASIC14.08□□□□□ -0.16
Cacna1sQ02789 Gm18443-201ENSMUST00000185358 556 ntBASIC14.08□□□□□ -0.16
Cacna1sQ02789 Gm28179-201ENSMUST00000188365 613 ntBASIC14.08□□□□□ -0.16
Cacna1sQ02789 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cacna1sQ02789 Gm7047-201ENSMUST00000196224 1063 ntBASIC14.08□□□□□ -0.16
Cacna1sQ02789 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC14.08□□□□□ -0.16
Cacna1sQ02789 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1sQ02789 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.08□□□□□ -0.16
Cacna1sQ02789 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1sQ02789 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1sQ02789 AC154517.2-201ENSMUST00000220829 2458 ntBASIC14.08□□□□□ -0.16
Cacna1sQ02789 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1sQ02789 Gm15599-201ENSMUST00000122283 1345 ntBASIC14.08□□□□□ -0.16
Cacna1sQ02789 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1sQ02789 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1sQ02789 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms