Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GabpaQ00422 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GabpaQ00422 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GabpaQ00422 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
GabpaQ00422 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GabpaQ00422 Gm6024-201ENSMUST00000117850 1558 ntBASIC12.91□□□□□ -0.34
GabpaQ00422 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
GabpaQ00422 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
GabpaQ00422 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.91□□□□□ -0.34
GabpaQ00422 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GabpaQ00422 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GabpaQ00422 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GabpaQ00422 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
GabpaQ00422 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
GabpaQ00422 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
GabpaQ00422 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
GabpaQ00422 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GabpaQ00422 Gm9133-201ENSMUST00000118289 540 ntBASIC12.91□□□□□ -0.34
GabpaQ00422 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GabpaQ00422 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
GabpaQ00422 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
GabpaQ00422 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GabpaQ00422 Gm7959-201ENSMUST00000221823 1078 ntBASIC12.91□□□□□ -0.34
GabpaQ00422 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GabpaQ00422 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
GabpaQ00422 AC154589.2-201ENSMUST00000228847 251 ntBASIC12.91□□□□□ -0.34
GabpaQ00422 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GabpaQ00422 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC12.91□□□□□ -0.34
GabpaQ00422 Gm25201-201ENSMUST00000083093 170 ntBASIC12.91□□□□□ -0.34
GabpaQ00422 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GabpaQ00422 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GabpaQ00422 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GabpaQ00422 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GabpaQ00422 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
GabpaQ00422 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
GabpaQ00422 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC12.91□□□□□ -0.34
GabpaQ00422 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
GabpaQ00422 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
GabpaQ00422 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
GabpaQ00422 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GabpaQ00422 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
GabpaQ00422 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GabpaQ00422 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
GabpaQ00422 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
GabpaQ00422 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12.91□□□□□ -0.34
GabpaQ00422 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
GabpaQ00422 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.91□□□□□ -0.34
GabpaQ00422 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
GabpaQ00422 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GabpaQ00422 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GabpaQ00422 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
GabpaQ00422 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
GabpaQ00422 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
GabpaQ00422 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
GabpaQ00422 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
GabpaQ00422 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GabpaQ00422 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GabpaQ00422 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
GabpaQ00422 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
GabpaQ00422 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
GabpaQ00422 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
GabpaQ00422 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.9□□□□□ -0.34
GabpaQ00422 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
GabpaQ00422 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GabpaQ00422 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.9□□□□□ -0.34
GabpaQ00422 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
GabpaQ00422 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
GabpaQ00422 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GabpaQ00422 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
GabpaQ00422 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC12.9□□□□□ -0.34
GabpaQ00422 Gm11801-201ENSMUST00000117807 746 ntBASIC12.9□□□□□ -0.34
GabpaQ00422 Gm13549-201ENSMUST00000118339 796 ntBASIC12.9□□□□□ -0.34
GabpaQ00422 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
GabpaQ00422 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC12.9□□□□□ -0.34
GabpaQ00422 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC12.9□□□□□ -0.34
GabpaQ00422 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC12.9□□□□□ -0.34
GabpaQ00422 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
GabpaQ00422 Gm25343-201ENSMUST00000157460 107 ntBASIC12.9□□□□□ -0.34
GabpaQ00422 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC12.9□□□□□ -0.34
GabpaQ00422 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
GabpaQ00422 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
GabpaQ00422 Gm18463-201ENSMUST00000207258 474 ntBASIC12.9□□□□□ -0.34
GabpaQ00422 Gm18460-201ENSMUST00000208088 464 ntBASIC12.9□□□□□ -0.34
GabpaQ00422 AC168279.1-201ENSMUST00000214611 382 ntBASIC12.9□□□□□ -0.34
GabpaQ00422 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC12.9□□□□□ -0.34
GabpaQ00422 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC12.9□□□□□ -0.34
GabpaQ00422 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.9□□□□□ -0.34
GabpaQ00422 AC159002.1-201ENSMUST00000226714 924 ntBASIC12.9□□□□□ -0.34
GabpaQ00422 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GabpaQ00422 Mir483-201ENSMUST00000093631 73 ntBASIC12.9□□□□□ -0.34
GabpaQ00422 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GabpaQ00422 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
GabpaQ00422 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
GabpaQ00422 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GabpaQ00422 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.9□□□□□ -0.34
GabpaQ00422 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
GabpaQ00422 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GabpaQ00422 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GabpaQ00422 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GabpaQ00422 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms