Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC14.28□□□□□ -0.12
Smarcc1P97496 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC14.28□□□□□ -0.12
Smarcc1P97496 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC14.28□□□□□ -0.12
Smarcc1P97496 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC14.28□□□□□ -0.12
Smarcc1P97496 Gm44008-201ENSMUST00000204345 412 ntBASIC14.28□□□□□ -0.12
Smarcc1P97496 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.28□□□□□ -0.12
Smarcc1P97496 Gm6653-201ENSMUST00000218063 1288 ntBASIC14.28□□□□□ -0.12
Smarcc1P97496 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcc1P97496 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcc1P97496 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcc1P97496 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.28□□□□□ -0.12
Smarcc1P97496 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcc1P97496 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Smarcc1P97496 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcc1P97496 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcc1P97496 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Smarcc1P97496 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Smarcc1P97496 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcc1P97496 Gm18986-201ENSMUST00000216029 1986 ntBASIC14.27□□□□□ -0.12
Smarcc1P97496 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcc1P97496 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Smarcc1P97496 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcc1P97496 Nudt13-207ENSMUST00000224311 1574 ntBASIC14.27□□□□□ -0.12
Smarcc1P97496 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcc1P97496 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcc1P97496 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcc1P97496 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Smarcc1P97496 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcc1P97496 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcc1P97496 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcc1P97496 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcc1P97496 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarcc1P97496 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcc1P97496 Gm24279-201ENSMUST00000104236 131 ntBASIC14.27□□□□□ -0.13
Smarcc1P97496 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcc1P97496 Gm25569-201ENSMUST00000157175 131 ntBASIC14.27□□□□□ -0.13
Smarcc1P97496 Olfml3-204ENSMUST00000169286 874 ntBASIC14.27□□□□□ -0.13
Smarcc1P97496 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcc1P97496 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Smarcc1P97496 Gm9625-201ENSMUST00000180422 955 ntBASIC14.27□□□□□ -0.13
Smarcc1P97496 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC14.27□□□□□ -0.13
Smarcc1P97496 AC122024.3-201ENSMUST00000217719 294 ntBASIC14.27□□□□□ -0.13
Smarcc1P97496 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcc1P97496 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcc1P97496 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcc1P97496 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcc1P97496 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcc1P97496 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcc1P97496 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcc1P97496 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Smarcc1P97496 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC14.26□□□□□ -0.13
Smarcc1P97496 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc1P97496 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc1P97496 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Smarcc1P97496 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc1P97496 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc1P97496 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc1P97496 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc1P97496 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc1P97496 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc1P97496 Gm28424-201ENSMUST00000187393 1319 ntBASIC14.26□□□□□ -0.13
Smarcc1P97496 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc1P97496 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc1P97496 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC14.26□□□□□ -0.13
Smarcc1P97496 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc1P97496 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC14.26□□□□□ -0.13
Smarcc1P97496 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC14.26□□□□□ -0.13
Smarcc1P97496 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC14.26□□□□□ -0.13
Smarcc1P97496 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC14.26□□□□□ -0.13
Smarcc1P97496 Gm26119-201ENSMUST00000175601 104 ntBASIC14.26□□□□□ -0.13
Smarcc1P97496 Gm19013-201ENSMUST00000183895 1222 ntBASIC14.26□□□□□ -0.13
Smarcc1P97496 Gm19014-201ENSMUST00000184828 1189 ntBASIC14.26□□□□□ -0.13
Smarcc1P97496 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc1P97496 Gm42511-201ENSMUST00000196160 234 ntBASIC14.26□□□□□ -0.13
Smarcc1P97496 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC14.26□□□□□ -0.13
Smarcc1P97496 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC14.26□□□□□ -0.13
Smarcc1P97496 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC14.26□□□□□ -0.13
Smarcc1P97496 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc1P97496 Gm5178-201ENSMUST00000219380 898 ntBASIC14.26□□□□□ -0.13
Smarcc1P97496 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc1P97496 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Smarcc1P97496 Mir326-201ENSMUST00000083637 95 ntBASIC14.26□□□□□ -0.13
Smarcc1P97496 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Smarcc1P97496 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc1P97496 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc1P97496 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc1P97496 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc1P97496 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc1P97496 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Smarcc1P97496 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc1P97496 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Smarcc1P97496 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc1P97496 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc1P97496 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc1P97496 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc1P97496 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc1P97496 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc1P97496 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Smarcc1P97496 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc1P97496 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms