Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgb1P63158 Efr3a-213ENSMUST00000211878 2541 ntTSL 5 BASIC12.6□□□□□ -0.39
Hmgb1P63158 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.6□□□□□ -0.39
Hmgb1P63158 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgb1P63158 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Hmgb1P63158 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgb1P63158 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgb1P63158 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Hmgb1P63158 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgb1P63158 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgb1P63158 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.6□□□□□ -0.39
Hmgb1P63158 Gm37040-201ENSMUST00000191740 1824 ntBASIC12.6□□□□□ -0.39
Hmgb1P63158 Gm45769-201ENSMUST00000204588 1828 ntBASIC12.6□□□□□ -0.39
Hmgb1P63158 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgb1P63158 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgb1P63158 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgb1P63158 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hmgb1P63158 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC12.6□□□□□ -0.39
Hmgb1P63158 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Hmgb1P63158 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgb1P63158 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgb1P63158 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.59□□□□□ -0.39
Hmgb1P63158 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.59□□□□□ -0.39
Hmgb1P63158 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.59□□□□□ -0.39
Hmgb1P63158 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Hmgb1P63158 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Hmgb1P63158 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgb1P63158 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgb1P63158 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgb1P63158 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgb1P63158 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.59□□□□□ -0.39
Hmgb1P63158 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgb1P63158 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Hmgb1P63158 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgb1P63158 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgb1P63158 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
Hmgb1P63158 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgb1P63158 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.59□□□□□ -0.39
Hmgb1P63158 Gm12196-201ENSMUST00000120954 262 ntBASIC12.59□□□□□ -0.39
Hmgb1P63158 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgb1P63158 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.59□□□□□ -0.39
Hmgb1P63158 Gm38151-201ENSMUST00000195085 289 ntBASIC12.59□□□□□ -0.39
Hmgb1P63158 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.59□□□□□ -0.39
Hmgb1P63158 Gm45575-201ENSMUST00000210283 548 ntBASIC12.59□□□□□ -0.39
Hmgb1P63158 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgb1P63158 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.59□□□□□ -0.39
Hmgb1P63158 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.59□□□□□ -0.39
Hmgb1P63158 Gm6867-201ENSMUST00000219165 425 ntBASIC12.59□□□□□ -0.39
Hmgb1P63158 AC173482.3-201ENSMUST00000225492 1212 ntBASIC12.59□□□□□ -0.39
Hmgb1P63158 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgb1P63158 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgb1P63158 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Hmgb1P63158 Olfr582-201ENSMUST00000098212 960 ntBASIC12.59□□□□□ -0.39
Hmgb1P63158 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgb1P63158 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgb1P63158 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgb1P63158 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgb1P63158 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.59□□□□□ -0.39
Hmgb1P63158 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgb1P63158 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgb1P63158 Olfr282-204ENSMUST00000215320 1573 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Hmgb1P63158 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Hmgb1P63158 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgb1P63158 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgb1P63158 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgb1P63158 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgb1P63158 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hmgb1P63158 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.59□□□□□ -0.39
Hmgb1P63158 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Hmgb1P63158 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Hmgb1P63158 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Hmgb1P63158 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Hmgb1P63158 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.58□□□□□ -0.4
Hmgb1P63158 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Hmgb1P63158 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgb1P63158 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgb1P63158 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Hmgb1P63158 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Hmgb1P63158 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgb1P63158 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.58□□□□□ -0.4
Hmgb1P63158 Gm7150-201ENSMUST00000122032 981 ntBASIC12.58□□□□□ -0.4
Hmgb1P63158 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgb1P63158 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgb1P63158 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgb1P63158 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgb1P63158 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgb1P63158 Gm20495-201ENSMUST00000173902 235 ntBASIC12.58□□□□□ -0.4
Hmgb1P63158 Gm8100-201ENSMUST00000182906 988 ntBASIC12.58□□□□□ -0.4
Hmgb1P63158 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgb1P63158 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
Hmgb1P63158 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgb1P63158 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgb1P63158 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgb1P63158 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgb1P63158 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Hmgb1P63158 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgb1P63158 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgb1P63158 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Hmgb1P63158 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgb1P63158 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms