Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.07□□□□□ -0.8
Sec61a1P61620 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.07□□□□□ -0.8
Sec61a1P61620 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Gm5706-201ENSMUST00000181525 993 ntBASIC10.07□□□□□ -0.8
Sec61a1P61620 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.07□□□□□ -0.8
Sec61a1P61620 Gm18711-201ENSMUST00000199341 750 ntBASIC10.07□□□□□ -0.8
Sec61a1P61620 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC10.07□□□□□ -0.8
Sec61a1P61620 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.07□□□□□ -0.8
Sec61a1P61620 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.07□□□□□ -0.8
Sec61a1P61620 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.07□□□□□ -0.8
Sec61a1P61620 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Sec61a1P61620 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Sec61a1P61620 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Gm45089-201ENSMUST00000208082 2040 ntBASIC10.07□□□□□ -0.8
Sec61a1P61620 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Sec61a1P61620 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Sec61a1P61620 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Sec61a1P61620 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sec61a1P61620 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Sec61a1P61620 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a1P61620 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a1P61620 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a1P61620 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a1P61620 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a1P61620 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.06□□□□□ -0.8
Sec61a1P61620 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a1P61620 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a1P61620 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a1P61620 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.06□□□□□ -0.8
Sec61a1P61620 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Sec61a1P61620 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a1P61620 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Sec61a1P61620 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a1P61620 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a1P61620 Gm45828-201ENSMUST00000206938 1836 ntBASIC10.06□□□□□ -0.8
Sec61a1P61620 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
Sec61a1P61620 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a1P61620 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Sec61a1P61620 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.06□□□□□ -0.8
Sec61a1P61620 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Sec61a1P61620 Gm27627-201ENSMUST00000183644 150 ntBASIC10.06□□□□□ -0.8
Sec61a1P61620 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.06□□□□□ -0.8
Sec61a1P61620 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a1P61620 Gm29615-201ENSMUST00000185371 697 ntBASIC10.06□□□□□ -0.8
Sec61a1P61620 Gm28224-201ENSMUST00000186078 697 ntBASIC10.06□□□□□ -0.8
Sec61a1P61620 Gm29001-201ENSMUST00000186177 697 ntBASIC10.06□□□□□ -0.8
Sec61a1P61620 Gm28292-201ENSMUST00000186593 697 ntBASIC10.06□□□□□ -0.8
Sec61a1P61620 Gm28101-201ENSMUST00000187608 697 ntBASIC10.06□□□□□ -0.8
Sec61a1P61620 Gm29076-201ENSMUST00000187689 697 ntBASIC10.06□□□□□ -0.8
Sec61a1P61620 Gm28302-201ENSMUST00000187931 697 ntBASIC10.06□□□□□ -0.8
Sec61a1P61620 Gm28646-201ENSMUST00000188220 697 ntBASIC10.06□□□□□ -0.8
Sec61a1P61620 Gm28205-201ENSMUST00000189177 697 ntBASIC10.06□□□□□ -0.8
Sec61a1P61620 Gm29032-201ENSMUST00000189797 697 ntBASIC10.06□□□□□ -0.8
Sec61a1P61620 Gm28695-201ENSMUST00000190300 697 ntBASIC10.06□□□□□ -0.8
Sec61a1P61620 Gm37448-201ENSMUST00000192795 697 ntBASIC10.06□□□□□ -0.8
Sec61a1P61620 CT025694.1-201ENSMUST00000226188 934 ntBASIC10.06□□□□□ -0.8
Sec61a1P61620 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a1P61620 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a1P61620 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Sec61a1P61620 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Sec61a1P61620 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a1P61620 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a1P61620 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a1P61620 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a1P61620 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a1P61620 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a1P61620 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.06□□□□□ -0.8
Sec61a1P61620 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a1P61620 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a1P61620 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Sec61a1P61620 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a1P61620 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a1P61620 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
Sec61a1P61620 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Sec61a1P61620 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a1P61620 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a1P61620 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a1P61620 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Sec61a1P61620 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a1P61620 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
Sec61a1P61620 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Sec61a1P61620 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms