Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.39□□□□□ -0.59
Lim2P56563 Gm19459-201ENSMUST00000176240 835 ntBASIC11.39□□□□□ -0.59
Lim2P56563 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lim2P56563 Gm7741-201ENSMUST00000181445 989 ntBASIC11.39□□□□□ -0.59
Lim2P56563 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lim2P56563 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Lim2P56563 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.39□□□□□ -0.59
Lim2P56563 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.39□□□□□ -0.59
Lim2P56563 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.39□□□□□ -0.59
Lim2P56563 Gm5996-201ENSMUST00000211110 718 ntBASIC11.39□□□□□ -0.59
Lim2P56563 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lim2P56563 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.39□□□□□ -0.59
Lim2P56563 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lim2P56563 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lim2P56563 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Lim2P56563 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Lim2P56563 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lim2P56563 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lim2P56563 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lim2P56563 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Lim2P56563 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Lim2P56563 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lim2P56563 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lim2P56563 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.39□□□□□ -0.59
Lim2P56563 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Lim2P56563 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lim2P56563 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Lim2P56563 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lim2P56563 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lim2P56563 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lim2P56563 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lim2P56563 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lim2P56563 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lim2P56563 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lim2P56563 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.38□□□□□ -0.59
Lim2P56563 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lim2P56563 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.38□□□□□ -0.59
Lim2P56563 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lim2P56563 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Lim2P56563 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lim2P56563 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lim2P56563 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Lim2P56563 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.38□□□□□ -0.59
Lim2P56563 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lim2P56563 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lim2P56563 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lim2P56563 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lim2P56563 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.38□□□□□ -0.59
Lim2P56563 Gm15131-201ENSMUST00000119124 595 ntBASIC11.38□□□□□ -0.59
Lim2P56563 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.38□□□□□ -0.59
Lim2P56563 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.38□□□□□ -0.59
Lim2P56563 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.38□□□□□ -0.59
Lim2P56563 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.38□□□□□ -0.59
Lim2P56563 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.38□□□□□ -0.59
Lim2P56563 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.38□□□□□ -0.59
Lim2P56563 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.38□□□□□ -0.59
Lim2P56563 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lim2P56563 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Lim2P56563 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lim2P56563 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.38□□□□□ -0.59
Lim2P56563 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lim2P56563 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lim2P56563 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lim2P56563 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lim2P56563 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lim2P56563 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.38□□□□□ -0.59
Lim2P56563 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.38□□□□□ -0.59
Lim2P56563 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lim2P56563 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lim2P56563 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lim2P56563 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lim2P56563 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lim2P56563 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Lim2P56563 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lim2P56563 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lim2P56563 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Lim2P56563 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lim2P56563 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lim2P56563 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.37□□□□□ -0.59
Lim2P56563 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lim2P56563 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lim2P56563 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lim2P56563 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Lim2P56563 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.37□□□□□ -0.59
Lim2P56563 Gm16166-201ENSMUST00000118291 787 ntBASIC11.37□□□□□ -0.59
Lim2P56563 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lim2P56563 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lim2P56563 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Lim2P56563 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.37□□□□□ -0.59
Lim2P56563 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Lim2P56563 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.37□□□□□ -0.59
Lim2P56563 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.37□□□□□ -0.59
Lim2P56563 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Lim2P56563 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Lim2P56563 Gm10179-201ENSMUST00000086233 688 ntBASIC11.37□□□□□ -0.59
Lim2P56563 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lim2P56563 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Lim2P56563 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lim2P56563 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lim2P56563 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms