Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.84□□□□□ -0.35
Rrp1P56183 Gm10807-201ENSMUST00000177134 795 ntBASIC12.84□□□□□ -0.35
Rrp1P56183 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rrp1P56183 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rrp1P56183 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.84□□□□□ -0.35
Rrp1P56183 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC12.84□□□□□ -0.35
Rrp1P56183 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.84□□□□□ -0.35
Rrp1P56183 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.84□□□□□ -0.35
Rrp1P56183 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.84□□□□□ -0.35
Rrp1P56183 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC12.84□□□□□ -0.35
Rrp1P56183 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC12.84□□□□□ -0.35
Rrp1P56183 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Rrp1P56183 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rrp1P56183 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.84□□□□□ -0.35
Rrp1P56183 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rrp1P56183 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Rrp1P56183 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rrp1P56183 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rrp1P56183 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Rrp1P56183 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rrp1P56183 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rrp1P56183 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rrp1P56183 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.84□□□□□ -0.35
Rrp1P56183 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Rrp1P56183 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rrp1P56183 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Rrp1P56183 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rrp1P56183 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Rrp1P56183 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.35
Rrp1P56183 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rrp1P56183 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.83□□□□□ -0.35
Rrp1P56183 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp1P56183 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Rrp1P56183 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp1P56183 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp1P56183 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Rrp1P56183 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp1P56183 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Rrp1P56183 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp1P56183 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Rrp1P56183 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp1P56183 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Rrp1P56183 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp1P56183 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp1P56183 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp1P56183 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp1P56183 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp1P56183 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp1P56183 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp1P56183 Gm8876-201ENSMUST00000120768 1122 ntBASIC12.83□□□□□ -0.36
Rrp1P56183 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp1P56183 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp1P56183 Gm25890-201ENSMUST00000177643 165 ntBASIC12.83□□□□□ -0.36
Rrp1P56183 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.83□□□□□ -0.36
Rrp1P56183 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.83□□□□□ -0.36
Rrp1P56183 Gm22614-201ENSMUST00000178300 165 ntBASIC12.83□□□□□ -0.36
Rrp1P56183 Gm18056-201ENSMUST00000207670 568 ntBASIC12.83□□□□□ -0.36
Rrp1P56183 Gm18061-201ENSMUST00000208350 562 ntBASIC12.83□□□□□ -0.36
Rrp1P56183 Gm18063-201ENSMUST00000208529 568 ntBASIC12.83□□□□□ -0.36
Rrp1P56183 Gm18052-201ENSMUST00000208750 559 ntBASIC12.83□□□□□ -0.36
Rrp1P56183 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.83□□□□□ -0.36
Rrp1P56183 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.83□□□□□ -0.36
Rrp1P56183 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.83□□□□□ -0.36
Rrp1P56183 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp1P56183 Gm22042-201ENSMUST00000082989 165 ntBASIC12.83□□□□□ -0.36
Rrp1P56183 Gm26110-201ENSMUST00000083971 165 ntBASIC12.83□□□□□ -0.36
Rrp1P56183 Mir433-201ENSMUST00000093564 124 ntBASIC12.83□□□□□ -0.36
Rrp1P56183 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp1P56183 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp1P56183 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Rrp1P56183 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp1P56183 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp1P56183 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp1P56183 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp1P56183 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rrp1P56183 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Rrp1P56183 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp1P56183 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rrp1P56183 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp1P56183 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp1P56183 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp1P56183 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Rrp1P56183 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp1P56183 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp1P56183 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.82□□□□□ -0.36
Rrp1P56183 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp1P56183 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Rrp1P56183 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Rrp1P56183 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.82□□□□□ -0.36
Rrp1P56183 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC12.82□□□□□ -0.36
Rrp1P56183 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.82□□□□□ -0.36
Rrp1P56183 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp1P56183 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp1P56183 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.82□□□□□ -0.36
Rrp1P56183 Gm29615-201ENSMUST00000185371 697 ntBASIC12.82□□□□□ -0.36
Rrp1P56183 Gm28224-201ENSMUST00000186078 697 ntBASIC12.82□□□□□ -0.36
Rrp1P56183 Gm29001-201ENSMUST00000186177 697 ntBASIC12.82□□□□□ -0.36
Rrp1P56183 Gm28292-201ENSMUST00000186593 697 ntBASIC12.82□□□□□ -0.36
Rrp1P56183 Gm28101-201ENSMUST00000187608 697 ntBASIC12.82□□□□□ -0.36
Rrp1P56183 Gm29076-201ENSMUST00000187689 697 ntBASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms