Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Atxn1P54254 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Atxn1P54254 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atxn1P54254 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.38□□□□□ -0.59
Atxn1P54254 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atxn1P54254 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Atxn1P54254 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.38□□□□□ -0.59
Atxn1P54254 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atxn1P54254 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Atxn1P54254 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Atxn1P54254 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Atxn1P54254 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.37□□□□□ -0.59
Atxn1P54254 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Atxn1P54254 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Atxn1P54254 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Atxn1P54254 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Atxn1P54254 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.37□□□□□ -0.59
Atxn1P54254 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Atxn1P54254 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.37□□□□□ -0.59
Atxn1P54254 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Atxn1P54254 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Atxn1P54254 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Atxn1P54254 Gm3329-201ENSMUST00000159873 556 ntBASIC11.37□□□□□ -0.59
Atxn1P54254 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC11.37□□□□□ -0.59
Atxn1P54254 Gm23400-201ENSMUST00000174994 102 ntBASIC11.37□□□□□ -0.59
Atxn1P54254 Gm26463-201ENSMUST00000175065 101 ntBASIC11.37□□□□□ -0.59
Atxn1P54254 Gm24332-201ENSMUST00000175102 102 ntBASIC11.37□□□□□ -0.59
Atxn1P54254 Gm25959-201ENSMUST00000175112 102 ntBASIC11.37□□□□□ -0.59
Atxn1P54254 Gm22475-201ENSMUST00000175169 102 ntBASIC11.37□□□□□ -0.59
Atxn1P54254 Gm22903-201ENSMUST00000175193 102 ntBASIC11.37□□□□□ -0.59
Atxn1P54254 Gm25070-201ENSMUST00000175237 102 ntBASIC11.37□□□□□ -0.59
Atxn1P54254 Gm24159-201ENSMUST00000175264 102 ntBASIC11.37□□□□□ -0.59
Atxn1P54254 Gm25299-201ENSMUST00000175283 102 ntBASIC11.37□□□□□ -0.59
Atxn1P54254 Gm23798-201ENSMUST00000175560 102 ntBASIC11.37□□□□□ -0.59
Atxn1P54254 Gm23802-201ENSMUST00000175565 102 ntBASIC11.37□□□□□ -0.59
Atxn1P54254 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.37□□□□□ -0.59
Atxn1P54254 Gm25708-201ENSMUST00000177687 102 ntBASIC11.37□□□□□ -0.59
Atxn1P54254 Gm24370-201ENSMUST00000178007 102 ntBASIC11.37□□□□□ -0.59
Atxn1P54254 Gm23049-201ENSMUST00000178068 102 ntBASIC11.37□□□□□ -0.59
Atxn1P54254 Gm28019-201ENSMUST00000178138 101 ntBASIC11.37□□□□□ -0.59
Atxn1P54254 Gm25571-201ENSMUST00000178322 102 ntBASIC11.37□□□□□ -0.59
Atxn1P54254 Gm25355-201ENSMUST00000178456 101 ntBASIC11.37□□□□□ -0.59
Atxn1P54254 Gm24975-201ENSMUST00000178492 101 ntBASIC11.37□□□□□ -0.59
Atxn1P54254 Gm23189-201ENSMUST00000178954 102 ntBASIC11.37□□□□□ -0.59
Atxn1P54254 Gm25100-201ENSMUST00000179750 101 ntBASIC11.37□□□□□ -0.59
Atxn1P54254 Gm23064-201ENSMUST00000179866 101 ntBASIC11.37□□□□□ -0.59
Atxn1P54254 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 Gm9136-201ENSMUST00000193368 454 ntBASIC11.37□□□□□ -0.59
Atxn1P54254 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.37□□□□□ -0.59
Atxn1P54254 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 Gm6108-201ENSMUST00000208365 367 ntBASIC11.37□□□□□ -0.59
Atxn1P54254 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.37□□□□□ -0.59
Atxn1P54254 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.37□□□□□ -0.59
Atxn1P54254 Gm2553-201ENSMUST00000215986 605 ntBASIC11.37□□□□□ -0.59
Atxn1P54254 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.37□□□□□ -0.59
Atxn1P54254 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.37□□□□□ -0.59
Atxn1P54254 CT030652.1-201ENSMUST00000227377 1235 ntBASIC11.37□□□□□ -0.59
Atxn1P54254 AC142266.1-201ENSMUST00000228107 415 ntBASIC11.37□□□□□ -0.59
Atxn1P54254 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Atxn1P54254 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Atxn1P54254 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.37□□□□□ -0.59
Atxn1P54254 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Atxn1P54254 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Atxn1P54254 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Atxn1P54254 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atxn1P54254 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Atxn1P54254 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms