Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fdft1P53798 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fdft1P53798 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fdft1P53798 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.39□□□□□ -0.59
Fdft1P53798 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Fdft1P53798 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.39□□□□□ -0.59
Fdft1P53798 Gm11500-201ENSMUST00000118237 601 ntBASIC11.39□□□□□ -0.59
Fdft1P53798 Gm14724-201ENSMUST00000118400 537 ntBASIC11.39□□□□□ -0.59
Fdft1P53798 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.39□□□□□ -0.59
Fdft1P53798 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.39□□□□□ -0.59
Fdft1P53798 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Fdft1P53798 Gm26047-201ENSMUST00000157308 113 ntBASIC11.39□□□□□ -0.59
Fdft1P53798 Gm8815-201ENSMUST00000173809 620 ntBASIC11.39□□□□□ -0.59
Fdft1P53798 Gm8100-201ENSMUST00000182906 988 ntBASIC11.39□□□□□ -0.59
Fdft1P53798 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Fdft1P53798 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.39□□□□□ -0.59
Fdft1P53798 Gm2965-201ENSMUST00000198365 343 ntBASIC11.39□□□□□ -0.59
Fdft1P53798 Gm26047-202ENSMUST00000198840 115 ntBASIC11.39□□□□□ -0.59
Fdft1P53798 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fdft1P53798 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.39□□□□□ -0.59
Fdft1P53798 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.39□□□□□ -0.59
Fdft1P53798 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fdft1P53798 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fdft1P53798 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Fdft1P53798 Gm10288-201ENSMUST00000084614 537 ntBASIC11.39□□□□□ -0.59
Fdft1P53798 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Fdft1P53798 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fdft1P53798 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Fdft1P53798 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fdft1P53798 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fdft1P53798 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fdft1P53798 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fdft1P53798 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fdft1P53798 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Fdft1P53798 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.39□□□□□ -0.59
Fdft1P53798 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fdft1P53798 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fdft1P53798 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fdft1P53798 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fdft1P53798 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Fdft1P53798 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fdft1P53798 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fdft1P53798 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fdft1P53798 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fdft1P53798 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Fdft1P53798 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fdft1P53798 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fdft1P53798 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fdft1P53798 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fdft1P53798 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.38□□□□□ -0.59
Fdft1P53798 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.38□□□□□ -0.59
Fdft1P53798 Gm12501-201ENSMUST00000119163 529 ntBASIC11.38□□□□□ -0.59
Fdft1P53798 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.38□□□□□ -0.59
Fdft1P53798 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.38□□□□□ -0.59
Fdft1P53798 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.38□□□□□ -0.59
Fdft1P53798 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fdft1P53798 Gm5714-201ENSMUST00000197343 566 ntBASIC11.38□□□□□ -0.59
Fdft1P53798 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fdft1P53798 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.38□□□□□ -0.59
Fdft1P53798 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fdft1P53798 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fdft1P53798 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fdft1P53798 Gm10254-201ENSMUST00000052888 867 ntBASIC11.38□□□□□ -0.59
Fdft1P53798 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Fdft1P53798 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Fdft1P53798 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.38□□□□□ -0.59
Fdft1P53798 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fdft1P53798 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Fdft1P53798 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fdft1P53798 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.38□□□□□ -0.59
Fdft1P53798 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fdft1P53798 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Fdft1P53798 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fdft1P53798 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Fdft1P53798 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Fdft1P53798 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fdft1P53798 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fdft1P53798 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fdft1P53798 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fdft1P53798 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Fdft1P53798 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Fdft1P53798 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fdft1P53798 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Fdft1P53798 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fdft1P53798 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Fdft1P53798 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fdft1P53798 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fdft1P53798 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fdft1P53798 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Fdft1P53798 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.37□□□□□ -0.59
Fdft1P53798 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Fdft1P53798 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Fdft1P53798 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Fdft1P53798 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Fdft1P53798 Gm14071-201ENSMUST00000117817 509 ntBASIC11.37□□□□□ -0.59
Fdft1P53798 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.37□□□□□ -0.59
Fdft1P53798 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Fdft1P53798 Gm12266-201ENSMUST00000120311 962 ntBASIC11.37□□□□□ -0.59
Fdft1P53798 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Fdft1P53798 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms