Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
Sox3P53784 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Sox3P53784 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Sox3P53784 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.98□□□□□ -0.65
Sox3P53784 Gm11422-201ENSMUST00000118925 1103 ntBASIC10.98□□□□□ -0.65
Sox3P53784 Gm6630-201ENSMUST00000119199 454 ntBASIC10.98□□□□□ -0.65
Sox3P53784 Gm5909-201ENSMUST00000119768 1281 ntBASIC10.98□□□□□ -0.65
Sox3P53784 Rprl1-201ENSMUST00000158050 327 ntBASIC10.98□□□□□ -0.65
Sox3P53784 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Sox3P53784 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Sox3P53784 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Sox3P53784 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Sox3P53784 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Sox3P53784 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Sox3P53784 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Sox3P53784 Gm17798-201ENSMUST00000182282 1035 ntBASIC10.98□□□□□ -0.65
Sox3P53784 Gm26989-201ENSMUST00000182608 749 ntBASIC10.98□□□□□ -0.65
Sox3P53784 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 Gm44270-201ENSMUST00000203084 1234 ntBASIC10.98□□□□□ -0.65
Sox3P53784 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 AC122350.1-201ENSMUST00000228135 533 ntBASIC10.98□□□□□ -0.65
Sox3P53784 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Sox3P53784 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.98□□□□□ -0.65
Sox3P53784 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Sox3P53784 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.98□□□□□ -0.65
Sox3P53784 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC10.98□□□□□ -0.65
Sox3P53784 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
Sox3P53784 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC10.98□□□□□ -0.65
Sox3P53784 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Sox3P53784 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.98□□□□□ -0.65
Sox3P53784 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.98□□□□□ -0.65
Sox3P53784 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Sox3P53784 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Sox3P53784 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Sox3P53784 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Sox3P53784 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox3P53784 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.97□□□□□ -0.65
Sox3P53784 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.97□□□□□ -0.65
Sox3P53784 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Sox3P53784 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox3P53784 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox3P53784 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox3P53784 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox3P53784 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.97□□□□□ -0.65
Sox3P53784 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox3P53784 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox3P53784 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox3P53784 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.97□□□□□ -0.65
Sox3P53784 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sox3P53784 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC10.97□□□□□ -0.65
Sox3P53784 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC10.97□□□□□ -0.65
Sox3P53784 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sox3P53784 Gm28686-201ENSMUST00000187404 609 ntBASIC10.97□□□□□ -0.65
Sox3P53784 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox3P53784 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC10.97□□□□□ -0.65
Sox3P53784 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox3P53784 Gm44953-201ENSMUST00000208745 1286 ntBASIC10.97□□□□□ -0.65
Sox3P53784 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox3P53784 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Sox3P53784 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Sox3P53784 Gm5805-201ENSMUST00000072779 456 ntBASIC10.97□□□□□ -0.65
Sox3P53784 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox3P53784 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Sox3P53784 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Sox3P53784 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox3P53784 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox3P53784 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox3P53784 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox3P53784 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox3P53784 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox3P53784 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms