Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.69□□□□□ -0.54
Sox1P53783 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox1P53783 Gm12774-201ENSMUST00000117881 416 ntBASIC11.69□□□□□ -0.54
Sox1P53783 Gm15617-201ENSMUST00000118973 771 ntBASIC11.69□□□□□ -0.54
Sox1P53783 Gm6758-201ENSMUST00000119643 1055 ntBASIC11.69□□□□□ -0.54
Sox1P53783 Gm13284-201ENSMUST00000121020 547 ntBASIC11.69□□□□□ -0.54
Sox1P53783 Gm14176-201ENSMUST00000121302 477 ntBASIC11.69□□□□□ -0.54
Sox1P53783 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC11.69□□□□□ -0.54
Sox1P53783 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox1P53783 Mir3091-201ENSMUST00000175086 76 ntBASIC11.69□□□□□ -0.54
Sox1P53783 Gm25591-201ENSMUST00000177317 94 ntBASIC11.69□□□□□ -0.54
Sox1P53783 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC11.69□□□□□ -0.54
Sox1P53783 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Sox1P53783 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox1P53783 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox1P53783 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.69□□□□□ -0.54
Sox1P53783 Gm7445-201ENSMUST00000192115 340 ntBASIC11.69□□□□□ -0.54
Sox1P53783 Gm38145-201ENSMUST00000192319 693 ntBASIC11.69□□□□□ -0.54
Sox1P53783 Gm37688-201ENSMUST00000195195 465 ntBASIC11.69□□□□□ -0.54
Sox1P53783 Gm5982-201ENSMUST00000196234 512 ntBASIC11.69□□□□□ -0.54
Sox1P53783 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox1P53783 Gm6859-201ENSMUST00000218614 989 ntBASIC11.69□□□□□ -0.54
Sox1P53783 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox1P53783 AC154407.1-201ENSMUST00000226777 526 ntBASIC11.69□□□□□ -0.54
Sox1P53783 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox1P53783 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox1P53783 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox1P53783 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox1P53783 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox1P53783 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox1P53783 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox1P53783 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox1P53783 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox1P53783 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox1P53783 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.69□□□□□ -0.54
Sox1P53783 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox1P53783 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox1P53783 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox1P53783 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox1P53783 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox1P53783 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox1P53783 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox1P53783 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox1P53783 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox1P53783 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Sox1P53783 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Sox1P53783 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox1P53783 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Sox1P53783 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC11.68□□□□□ -0.54
Sox1P53783 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.68□□□□□ -0.54
Sox1P53783 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox1P53783 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox1P53783 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Sox1P53783 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox1P53783 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox1P53783 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox1P53783 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Sox1P53783 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Sox1P53783 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox1P53783 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox1P53783 Gm8111-201ENSMUST00000117659 987 ntBASIC11.68□□□□□ -0.54
Sox1P53783 Rpl7a-ps12-201ENSMUST00000120384 794 ntBASIC11.68□□□□□ -0.54
Sox1P53783 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox1P53783 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox1P53783 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC11.68□□□□□ -0.54
Sox1P53783 Gm22885-201ENSMUST00000157410 107 ntBASIC11.68□□□□□ -0.54
Sox1P53783 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox1P53783 Gm6291-201ENSMUST00000179994 309 ntBASIC11.68□□□□□ -0.54
Sox1P53783 Gm37858-201ENSMUST00000192759 1231 ntBASIC11.68□□□□□ -0.54
Sox1P53783 Gm19918-201ENSMUST00000194858 400 ntBASIC11.68□□□□□ -0.54
Sox1P53783 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.68□□□□□ -0.54
Sox1P53783 AC102523.1-201ENSMUST00000228706 1144 ntBASIC11.68□□□□□ -0.54
Sox1P53783 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.68□□□□□ -0.54
Sox1P53783 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Sox1P53783 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox1P53783 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox1P53783 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Sox1P53783 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox1P53783 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.68□□□□□ -0.54
Sox1P53783 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox1P53783 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox1P53783 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox1P53783 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox1P53783 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.68□□□□□ -0.54
Sox1P53783 Gm42499-201ENSMUST00000196193 1412 ntBASIC11.68□□□□□ -0.54
Sox1P53783 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.68□□□□□ -0.54
Sox1P53783 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Sox1P53783 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox1P53783 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.68□□□□□ -0.54
Sox1P53783 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox1P53783 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox1P53783 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox1P53783 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox1P53783 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox1P53783 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Sox1P53783 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox1P53783 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Sox1P53783 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox1P53783 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox1P53783 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms