Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pdx1P52946 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pdx1P52946 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pdx1P52946 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pdx1P52946 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Pdx1P52946 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Pdx1P52946 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.25□□□□□ -0.61
Pdx1P52946 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pdx1P52946 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Pdx1P52946 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pdx1P52946 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.25□□□□□ -0.61
Pdx1P52946 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Pdx1P52946 Gm4294-201ENSMUST00000105169 614 ntBASIC11.25□□□□□ -0.61
Pdx1P52946 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Pdx1P52946 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Pdx1P52946 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Pdx1P52946 Gm8111-201ENSMUST00000117659 987 ntBASIC11.25□□□□□ -0.61
Pdx1P52946 Gm15617-201ENSMUST00000118973 771 ntBASIC11.25□□□□□ -0.61
Pdx1P52946 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.25□□□□□ -0.61
Pdx1P52946 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pdx1P52946 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pdx1P52946 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.25□□□□□ -0.61
Pdx1P52946 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.25□□□□□ -0.61
Pdx1P52946 Gm10731-201ENSMUST00000181171 448 ntBASIC11.25□□□□□ -0.61
Pdx1P52946 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.25□□□□□ -0.61
Pdx1P52946 Gm18753-201ENSMUST00000201000 566 ntBASIC11.25□□□□□ -0.61
Pdx1P52946 Gm43916-201ENSMUST00000205062 967 ntBASIC11.25□□□□□ -0.61
Pdx1P52946 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.25□□□□□ -0.61
Pdx1P52946 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pdx1P52946 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.25□□□□□ -0.61
Pdx1P52946 Nsd1-205ENSMUST00000224693 852 ntBASIC11.25□□□□□ -0.61
Pdx1P52946 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pdx1P52946 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Pdx1P52946 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Pdx1P52946 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pdx1P52946 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pdx1P52946 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Pdx1P52946 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pdx1P52946 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pdx1P52946 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pdx1P52946 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pdx1P52946 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pdx1P52946 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pdx1P52946 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Pdx1P52946 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pdx1P52946 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.25□□□□□ -0.61
Pdx1P52946 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pdx1P52946 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Pdx1P52946 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pdx1P52946 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pdx1P52946 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.25□□□□□ -0.61
Pdx1P52946 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdx1P52946 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.24□□□□□ -0.61
Pdx1P52946 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.24□□□□□ -0.61
Pdx1P52946 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdx1P52946 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.24□□□□□ -0.61
Pdx1P52946 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdx1P52946 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pdx1P52946 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Pdx1P52946 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Pdx1P52946 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pdx1P52946 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdx1P52946 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdx1P52946 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdx1P52946 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pdx1P52946 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.24□□□□□ -0.61
Pdx1P52946 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdx1P52946 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdx1P52946 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdx1P52946 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdx1P52946 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pdx1P52946 Gm15615-201ENSMUST00000118876 198 ntBASIC11.24□□□□□ -0.61
Pdx1P52946 Gm8737-201ENSMUST00000122208 642 ntBASIC11.24□□□□□ -0.61
Pdx1P52946 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.24□□□□□ -0.61
Pdx1P52946 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pdx1P52946 Gm21092-201ENSMUST00000178995 955 ntBASIC11.24□□□□□ -0.61
Pdx1P52946 Gm9353-201ENSMUST00000200472 604 ntBASIC11.24□□□□□ -0.61
Pdx1P52946 Gm44315-201ENSMUST00000203041 219 ntBASIC11.24□□□□□ -0.61
Pdx1P52946 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.24□□□□□ -0.61
Pdx1P52946 Gm45118-201ENSMUST00000208928 825 ntBASIC11.24□□□□□ -0.61
Pdx1P52946 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.24□□□□□ -0.61
Pdx1P52946 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdx1P52946 Gm23105-201ENSMUST00000083719 134 ntBASIC11.24□□□□□ -0.61
Pdx1P52946 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pdx1P52946 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Pdx1P52946 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdx1P52946 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdx1P52946 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdx1P52946 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Pdx1P52946 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.24□□□□□ -0.61
Pdx1P52946 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdx1P52946 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdx1P52946 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pdx1P52946 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pdx1P52946 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Pdx1P52946 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Pdx1P52946 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdx1P52946 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdx1P52946 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pdx1P52946 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms