Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.58□□□□□ -0.56
Vps4bP46467 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vps4bP46467 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vps4bP46467 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Vps4bP46467 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
Vps4bP46467 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Vps4bP46467 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vps4bP46467 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.58□□□□□ -0.56
Vps4bP46467 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vps4bP46467 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.58□□□□□ -0.56
Vps4bP46467 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vps4bP46467 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vps4bP46467 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Vps4bP46467 Btrc-209ENSMUST00000224478 2194 ntBASIC11.58□□□□□ -0.56
Vps4bP46467 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vps4bP46467 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vps4bP46467 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Vps4bP46467 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Vps4bP46467 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vps4bP46467 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vps4bP46467 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vps4bP46467 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.58□□□□□ -0.56
Vps4bP46467 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Vps4bP46467 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Vps4bP46467 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps4bP46467 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Vps4bP46467 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps4bP46467 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps4bP46467 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps4bP46467 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps4bP46467 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps4bP46467 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Vps4bP46467 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps4bP46467 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps4bP46467 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps4bP46467 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps4bP46467 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps4bP46467 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps4bP46467 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Vps4bP46467 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Vps4bP46467 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps4bP46467 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Vps4bP46467 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps4bP46467 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.57□□□□□ -0.56
Vps4bP46467 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
Vps4bP46467 Gm11628-201ENSMUST00000117568 171 ntBASIC11.57□□□□□ -0.56
Vps4bP46467 Gm12380-201ENSMUST00000119012 544 ntBASIC11.57□□□□□ -0.56
Vps4bP46467 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.57□□□□□ -0.56
Vps4bP46467 Mir1943-201ENSMUST00000158276 73 ntBASIC11.57□□□□□ -0.56
Vps4bP46467 Gm6108-201ENSMUST00000208365 367 ntBASIC11.57□□□□□ -0.56
Vps4bP46467 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.57□□□□□ -0.56
Vps4bP46467 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.57□□□□□ -0.56
Vps4bP46467 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.57□□□□□ -0.56
Vps4bP46467 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.57□□□□□ -0.56
Vps4bP46467 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps4bP46467 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps4bP46467 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps4bP46467 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.57□□□□□ -0.56
Vps4bP46467 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Vps4bP46467 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Vps4bP46467 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps4bP46467 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps4bP46467 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Vps4bP46467 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.57□□□□□ -0.56
Vps4bP46467 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Vps4bP46467 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Vps4bP46467 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.57□□□□□ -0.56
Vps4bP46467 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps4bP46467 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Vps4bP46467 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vps4bP46467 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.56□□□□□ -0.56
Vps4bP46467 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Vps4bP46467 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Vps4bP46467 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Vps4bP46467 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vps4bP46467 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Vps4bP46467 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vps4bP46467 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vps4bP46467 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vps4bP46467 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Vps4bP46467 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vps4bP46467 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vps4bP46467 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vps4bP46467 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
Vps4bP46467 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Vps4bP46467 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.56□□□□□ -0.56
Vps4bP46467 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vps4bP46467 Gm12196-201ENSMUST00000120954 262 ntBASIC11.56□□□□□ -0.56
Vps4bP46467 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.56□□□□□ -0.56
Vps4bP46467 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.56□□□□□ -0.56
Vps4bP46467 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Vps4bP46467 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vps4bP46467 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.56□□□□□ -0.56
Vps4bP46467 Gm38151-201ENSMUST00000195085 289 ntBASIC11.56□□□□□ -0.56
Vps4bP46467 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vps4bP46467 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Vps4bP46467 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.56□□□□□ -0.56
Vps4bP46467 Gm45575-201ENSMUST00000210283 548 ntBASIC11.56□□□□□ -0.56
Vps4bP46467 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vps4bP46467 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms