Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Gm3765-201ENSMUST00000130985 1447 ntBASIC10.81□□□□□ -0.68
Nkx2-6P43688 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx2-6P43688 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.8□□□□□ -0.68
Nkx2-6P43688 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-6P43688 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Gm25492-201ENSMUST00000157383 129 ntBASIC10.8□□□□□ -0.68
Nkx2-6P43688 Gm25554-201ENSMUST00000158075 113 ntBASIC10.8□□□□□ -0.68
Nkx2-6P43688 Gm17709-201ENSMUST00000174536 1096 ntBASIC10.8□□□□□ -0.68
Nkx2-6P43688 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Gm19015-201ENSMUST00000184002 1189 ntBASIC10.8□□□□□ -0.68
Nkx2-6P43688 Gm7593-201ENSMUST00000187246 644 ntBASIC10.8□□□□□ -0.68
Nkx2-6P43688 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Nkx2-6P43688 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-6P43688 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-6P43688 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.8□□□□□ -0.68
Nkx2-6P43688 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.8□□□□□ -0.68
Nkx2-6P43688 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-6P43688 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-6P43688 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.8□□□□□ -0.68
Nkx2-6P43688 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-6P43688 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-6P43688 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Nkx2-6P43688 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-6P43688 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-6P43688 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-6P43688 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-6P43688 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.79□□□□□ -0.68
Nkx2-6P43688 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-6P43688 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-6P43688 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-6P43688 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC10.79□□□□□ -0.68
Nkx2-6P43688 Gm11340-201ENSMUST00000119226 412 ntBASIC10.79□□□□□ -0.68
Nkx2-6P43688 Gm15549-201ENSMUST00000121595 622 ntBASIC10.79□□□□□ -0.68
Nkx2-6P43688 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC10.79□□□□□ -0.68
Nkx2-6P43688 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC10.79□□□□□ -0.68
Nkx2-6P43688 Gm22877-201ENSMUST00000175451 105 ntBASIC10.79□□□□□ -0.68
Nkx2-6P43688 Gm9135-201ENSMUST00000182963 990 ntBASIC10.79□□□□□ -0.68
Nkx2-6P43688 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC10.79□□□□□ -0.68
Nkx2-6P43688 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC10.79□□□□□ -0.68
Nkx2-6P43688 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.79□□□□□ -0.68
Nkx2-6P43688 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.79□□□□□ -0.68
Nkx2-6P43688 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC10.79□□□□□ -0.68
Nkx2-6P43688 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms