Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
HttP42859 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
HttP42859 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
HttP42859 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
HttP42859 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
HttP42859 Btn2a2-204ENSMUST00000223877 2109 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.54
HttP42859 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
HttP42859 Katnal2-203ENSMUST00000123650 638 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
HttP42859 Wdr17-204ENSMUST00000129132 1043 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
HttP42859 1700028P15Rik-203ENSMUST00000151904 519 ntTSL 3 BASIC11.71□□□□□ -0.54
HttP42859 Tnni1-208ENSMUST00000154463 749 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
HttP42859 Gm6665-201ENSMUST00000165131 258 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
HttP42859 D130017N08Rik-201ENSMUST00000180460 510 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
HttP42859 Gm42867-201ENSMUST00000202995 469 ntBASIC11.71□□□□□ -0.54
HttP42859 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC11.71□□□□□ -0.54
HttP42859 AC129590.1-201ENSMUST00000225573 852 ntBASIC11.71□□□□□ -0.54
HttP42859 AC167019.2-201ENSMUST00000227335 845 ntBASIC11.71□□□□□ -0.54
HttP42859 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
HttP42859 Gm16410-201ENSMUST00000094550 774 ntBASIC11.71□□□□□ -0.54
HttP42859 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC11.71□□□□□ -0.54
HttP42859 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
HttP42859 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.71□□□□□ -0.54
HttP42859 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
HttP42859 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
HttP42859 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
HttP42859 Ccdc83-201ENSMUST00000040413 1546 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
HttP42859 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
HttP42859 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HttP42859 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HttP42859 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HttP42859 Ppih-205ENSMUST00000106321 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HttP42859 Gm15353-201ENSMUST00000110860 702 ntTSL 5 BASIC11.7□□□□□ -0.54
HttP42859 Gm12397-201ENSMUST00000117674 615 ntBASIC11.7□□□□□ -0.54
HttP42859 Gm15208-201ENSMUST00000134448 493 ntTSL 3 BASIC11.7□□□□□ -0.54
HttP42859 Optc-204ENSMUST00000149380 1180 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
HttP42859 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC11.7□□□□□ -0.54
HttP42859 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
HttP42859 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC11.7□□□□□ -0.54
HttP42859 Gm8557-201ENSMUST00000220777 475 ntBASIC11.7□□□□□ -0.54
HttP42859 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
HttP42859 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
HttP42859 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
HttP42859 A1cf-204ENSMUST00000224564 1432 ntBASIC11.7□□□□□ -0.54
HttP42859 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HttP42859 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HttP42859 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.7□□□□□ -0.54
HttP42859 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
HttP42859 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HttP42859 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HttP42859 AC124561.1-202ENSMUST00000228652 1929 ntBASIC11.7□□□□□ -0.54
HttP42859 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
HttP42859 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HttP42859 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.7□□□□□ -0.54
HttP42859 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HttP42859 Gm14853-201ENSMUST00000116081 549 ntBASIC11.7□□□□□ -0.54
HttP42859 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
HttP42859 4930448D08Rik-201ENSMUST00000149958 1247 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
HttP42859 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
HttP42859 Gm23999-201ENSMUST00000158057 104 ntBASIC11.7□□□□□ -0.54
HttP42859 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
HttP42859 4930449E01Rik-202ENSMUST00000188698 532 ntTSL 3 BASIC11.7□□□□□ -0.54
HttP42859 Gm29487-201ENSMUST00000190146 256 ntBASIC11.7□□□□□ -0.54
HttP42859 Gm42875-201ENSMUST00000197674 1015 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
HttP42859 Gm43833-201ENSMUST00000198828 293 ntBASIC11.7□□□□□ -0.54
HttP42859 Gm28053-203ENSMUST00000204408 351 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
HttP42859 AC165260.3-201ENSMUST00000225101 665 ntBASIC11.7□□□□□ -0.54
HttP42859 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
HttP42859 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HttP42859 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
HttP42859 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
HttP42859 2310016D03Rik-201ENSMUST00000190206 1547 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
HttP42859 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HttP42859 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HttP42859 Gm6721-201ENSMUST00000218353 1445 ntBASIC11.7□□□□□ -0.54
HttP42859 Tmem29-201ENSMUST00000059256 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HttP42859 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
HttP42859 Phactr1-214ENSMUST00000149235 2076 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
HttP42859 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
HttP42859 5330411J11Rik-201ENSMUST00000137162 1635 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
HttP42859 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
HttP42859 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HttP42859 Serpina1b-201ENSMUST00000095450 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HttP42859 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
HttP42859 Gm22669-201ENSMUST00000158723 318 ntBASIC11.69□□□□□ -0.54
HttP42859 Gm18119-201ENSMUST00000219972 616 ntBASIC11.69□□□□□ -0.54
HttP42859 AC163351.1-201ENSMUST00000225539 737 ntBASIC11.69□□□□□ -0.54
HttP42859 CT025679.1-201ENSMUST00000227106 449 ntBASIC11.69□□□□□ -0.54
HttP42859 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HttP42859 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HttP42859 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
HttP42859 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
HttP42859 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HttP42859 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
HttP42859 Kcnk2-209ENSMUST00000194402 1373 ntTSL 5 BASIC11.69□□□□□ -0.54
HttP42859 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
HttP42859 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HttP42859 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
HttP42859 Gm15661-201ENSMUST00000117390 556 ntBASIC11.69□□□□□ -0.54
HttP42859 Gm15539-201ENSMUST00000118452 566 ntBASIC11.69□□□□□ -0.54
HttP42859 Gm12136-201ENSMUST00000120460 1209 ntBASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms