Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxc5P32043 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxc5P32043 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxc5P32043 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Hoxc5P32043 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxc5P32043 Gm11439-201ENSMUST00000118598 409 ntBASIC10.56□□□□□ -0.72
Hoxc5P32043 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.56□□□□□ -0.72
Hoxc5P32043 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxc5P32043 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.56□□□□□ -0.72
Hoxc5P32043 Gm20495-201ENSMUST00000173902 235 ntBASIC10.56□□□□□ -0.72
Hoxc5P32043 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxc5P32043 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.56□□□□□ -0.72
Hoxc5P32043 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxc5P32043 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxc5P32043 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxc5P32043 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxc5P32043 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Hoxc5P32043 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxc5P32043 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.56□□□□□ -0.72
Hoxc5P32043 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxc5P32043 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxc5P32043 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Hoxc5P32043 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.56□□□□□ -0.72
Hoxc5P32043 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxc5P32043 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxc5P32043 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxc5P32043 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxc5P32043 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Hoxc5P32043 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxc5P32043 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxc5P32043 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Hoxc5P32043 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Hoxc5P32043 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Hoxc5P32043 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxc5P32043 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxc5P32043 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxc5P32043 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxc5P32043 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxc5P32043 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC10.55□□□□□ -0.72
Hoxc5P32043 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Hoxc5P32043 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxc5P32043 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxc5P32043 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxc5P32043 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Hoxc5P32043 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxc5P32043 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxc5P32043 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxc5P32043 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxc5P32043 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxc5P32043 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.55□□□□□ -0.72
Hoxc5P32043 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxc5P32043 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxc5P32043 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.55□□□□□ -0.72
Hoxc5P32043 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxc5P32043 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC10.55□□□□□ -0.72
Hoxc5P32043 Gm25881-201ENSMUST00000157783 103 ntBASIC10.55□□□□□ -0.72
Hoxc5P32043 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC10.55□□□□□ -0.72
Hoxc5P32043 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Hoxc5P32043 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC10.55□□□□□ -0.72
Hoxc5P32043 Gm45186-201ENSMUST00000206874 478 ntBASIC10.55□□□□□ -0.72
Hoxc5P32043 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxc5P32043 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.55□□□□□ -0.72
Hoxc5P32043 AC107638.1-201ENSMUST00000213690 1061 ntBASIC10.55□□□□□ -0.72
Hoxc5P32043 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Hoxc5P32043 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxc5P32043 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxc5P32043 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxc5P32043 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxc5P32043 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxc5P32043 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.55□□□□□ -0.72
Hoxc5P32043 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxc5P32043 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.55□□□□□ -0.72
Hoxc5P32043 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxc5P32043 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxc5P32043 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Hoxc5P32043 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.55□□□□□ -0.72
Hoxc5P32043 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Hoxc5P32043 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.55□□□□□ -0.72
Hoxc5P32043 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
Hoxc5P32043 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxc5P32043 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxc5P32043 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxc5P32043 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxc5P32043 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Hoxc5P32043 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxc5P32043 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxc5P32043 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxc5P32043 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.55□□□□□ -0.72
Hoxc5P32043 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxc5P32043 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxc5P32043 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.55□□□□□ -0.72
Hoxc5P32043 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxc5P32043 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hoxc5P32043 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hoxc5P32043 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.54□□□□□ -0.72
Hoxc5P32043 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
Hoxc5P32043 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.54□□□□□ -0.72
Hoxc5P32043 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.54□□□□□ -0.72
Hoxc5P32043 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hoxc5P32043 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms