Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col2a1P28481 Mir6941-201ENSMUST00000184711 59 ntBASIC12.78□□□□□ -0.36
Col2a1P28481 Gm5621-201ENSMUST00000187303 640 ntBASIC12.78□□□□□ -0.36
Col2a1P28481 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col2a1P28481 Gm5700-201ENSMUST00000191483 989 ntBASIC12.78□□□□□ -0.36
Col2a1P28481 Gm43564-201ENSMUST00000196185 211 ntBASIC12.78□□□□□ -0.36
Col2a1P28481 Gm42433-201ENSMUST00000196806 940 ntBASIC12.78□□□□□ -0.36
Col2a1P28481 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col2a1P28481 Gm43506-201ENSMUST00000200675 753 ntBASIC12.78□□□□□ -0.36
Col2a1P28481 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col2a1P28481 Gm43482-201ENSMUST00000202797 1861 ntBASIC12.78□□□□□ -0.36
Col2a1P28481 Gm19178-201ENSMUST00000217524 1819 ntBASIC12.78□□□□□ -0.36
Col2a1P28481 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC12.78□□□□□ -0.36
Col2a1P28481 AC153962.2-201ENSMUST00000219417 550 ntBASIC12.78□□□□□ -0.36
Col2a1P28481 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col2a1P28481 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col2a1P28481 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Col2a1P28481 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Col2a1P28481 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Col2a1P28481 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col2a1P28481 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col2a1P28481 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col2a1P28481 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col2a1P28481 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col2a1P28481 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col2a1P28481 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col2a1P28481 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col2a1P28481 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col2a1P28481 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.78□□□□□ -0.36
Col2a1P28481 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col2a1P28481 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col2a1P28481 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC12.78□□□□□ -0.36
Col2a1P28481 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col2a1P28481 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col2a1P28481 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.78□□□□□ -0.36
Col2a1P28481 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col2a1P28481 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col2a1P28481 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col2a1P28481 Ighv13-1-201ENSMUST00000103480 294 ntBASIC12.78□□□□□ -0.36
Col2a1P28481 Gm5257-201ENSMUST00000121823 790 ntBASIC12.78□□□□□ -0.36
Col2a1P28481 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col2a1P28481 Gm25569-201ENSMUST00000157175 131 ntBASIC12.78□□□□□ -0.36
Col2a1P28481 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col2a1P28481 Gm45085-201ENSMUST00000209100 441 ntBASIC12.78□□□□□ -0.36
Col2a1P28481 Gm18499-201ENSMUST00000220808 1021 ntBASIC12.78□□□□□ -0.36
Col2a1P28481 CT010480.2-201ENSMUST00000225424 737 ntBASIC12.78□□□□□ -0.36
Col2a1P28481 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col2a1P28481 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col2a1P28481 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col2a1P28481 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col2a1P28481 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col2a1P28481 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.36
Col2a1P28481 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col2a1P28481 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col2a1P28481 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col2a1P28481 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Col2a1P28481 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col2a1P28481 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col2a1P28481 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col2a1P28481 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col2a1P28481 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col2a1P28481 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
Col2a1P28481 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.77□□□□□ -0.36
Col2a1P28481 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col2a1P28481 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.77□□□□□ -0.36
Col2a1P28481 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col2a1P28481 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col2a1P28481 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col2a1P28481 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col2a1P28481 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Col2a1P28481 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.77□□□□□ -0.37
Col2a1P28481 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col2a1P28481 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC12.77□□□□□ -0.37
Col2a1P28481 Gm11996-201ENSMUST00000117538 915 ntBASIC12.77□□□□□ -0.37
Col2a1P28481 Gm15136-201ENSMUST00000120552 533 ntBASIC12.77□□□□□ -0.37
Col2a1P28481 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col2a1P28481 Gm12906-201ENSMUST00000154610 441 ntBASIC12.77□□□□□ -0.37
Col2a1P28481 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Col2a1P28481 Mipep-ps-201ENSMUST00000177439 291 ntBASIC12.77□□□□□ -0.37
Col2a1P28481 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col2a1P28481 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col2a1P28481 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col2a1P28481 Gm17889-201ENSMUST00000198410 598 ntBASIC12.77□□□□□ -0.37
Col2a1P28481 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col2a1P28481 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC12.77□□□□□ -0.37
Col2a1P28481 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC12.77□□□□□ -0.37
Col2a1P28481 Gm8170-201ENSMUST00000218581 945 ntBASIC12.77□□□□□ -0.37
Col2a1P28481 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC12.77□□□□□ -0.37
Col2a1P28481 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC12.77□□□□□ -0.37
Col2a1P28481 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col2a1P28481 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Col2a1P28481 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Col2a1P28481 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col2a1P28481 Gm5449-201ENSMUST00000081132 357 ntBASIC12.77□□□□□ -0.37
Col2a1P28481 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Col2a1P28481 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Col2a1P28481 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col2a1P28481 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.77□□□□□ -0.37
Col2a1P28481 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col2a1P28481 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms