Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Gm14201-201ENSMUST00000117627 289 ntBASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Gm15549-201ENSMUST00000121595 622 ntBASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Gm15881-201ENSMUST00000148792 942 ntBASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Mir8115-201ENSMUST00000184992 119 ntBASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Gm42919-201ENSMUST00000197753 1284 ntBASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Gm43275-201ENSMUST00000202053 1020 ntBASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Gm45166-201ENSMUST00000209073 683 ntBASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Gm2594-201ENSMUST00000214774 742 ntBASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 AC115122.1-201ENSMUST00000224850 1040 ntBASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 AC171241.1-201ENSMUST00000228144 1166 ntBASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Tnfrsf1bP25119 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.58□□□□□ -0.71
Tnfrsf1bP25119 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC10.58□□□□□ -0.71
Tnfrsf1bP25119 Gm9387-201ENSMUST00000098624 1320 ntBASIC10.58□□□□□ -0.71
Tnfrsf1bP25119 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Gm12419-201ENSMUST00000116649 636 ntBASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Gm22902-201ENSMUST00000158488 302 ntBASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Gm17825-201ENSMUST00000206836 794 ntBASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 CT025561.1-201ENSMUST00000214972 674 ntBASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 AC154849.4-201ENSMUST00000224868 365 ntBASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 AC122350.1-201ENSMUST00000228135 533 ntBASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Gm10254-201ENSMUST00000052888 867 ntBASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tnfrsf1bP25119 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms