Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6bP23440 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pde6bP23440 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pde6bP23440 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6bP23440 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6bP23440 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.53□□□□□ -0.4
Pde6bP23440 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6bP23440 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6bP23440 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pde6bP23440 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6bP23440 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6bP23440 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6bP23440 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6bP23440 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pde6bP23440 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Pde6bP23440 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Pde6bP23440 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.52□□□□□ -0.4
Pde6bP23440 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pde6bP23440 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.52□□□□□ -0.4
Pde6bP23440 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pde6bP23440 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pde6bP23440 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pde6bP23440 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
Pde6bP23440 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pde6bP23440 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pde6bP23440 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.52□□□□□ -0.4
Pde6bP23440 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Pde6bP23440 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pde6bP23440 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Pde6bP23440 AC129336.1-201ENSMUST00000220224 2277 ntBASIC12.52□□□□□ -0.41
Pde6bP23440 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pde6bP23440 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Pde6bP23440 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.52□□□□□ -0.41
Pde6bP23440 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Pde6bP23440 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.52□□□□□ -0.41
Pde6bP23440 Gm22877-201ENSMUST00000175451 105 ntBASIC12.52□□□□□ -0.41
Pde6bP23440 Gm37319-201ENSMUST00000193500 636 ntBASIC12.52□□□□□ -0.41
Pde6bP23440 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.52□□□□□ -0.41
Pde6bP23440 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.52□□□□□ -0.41
Pde6bP23440 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Pde6bP23440 Gm9139-201ENSMUST00000218817 700 ntBASIC12.52□□□□□ -0.41
Pde6bP23440 Gm4978-201ENSMUST00000071565 801 ntBASIC12.52□□□□□ -0.41
Pde6bP23440 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pde6bP23440 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pde6bP23440 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pde6bP23440 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.52□□□□□ -0.41
Pde6bP23440 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.41
Pde6bP23440 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pde6bP23440 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pde6bP23440 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pde6bP23440 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6bP23440 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6bP23440 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6bP23440 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pde6bP23440 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6bP23440 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6bP23440 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6bP23440 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6bP23440 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6bP23440 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Pde6bP23440 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6bP23440 Gm14219-201ENSMUST00000120414 288 ntBASIC12.51□□□□□ -0.41
Pde6bP23440 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6bP23440 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC12.51□□□□□ -0.41
Pde6bP23440 Gm29410-201ENSMUST00000188383 694 ntBASIC12.51□□□□□ -0.41
Pde6bP23440 AC124457.1-201ENSMUST00000198845 120 ntBASIC12.51□□□□□ -0.41
Pde6bP23440 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.51□□□□□ -0.41
Pde6bP23440 Gm44044-201ENSMUST00000205178 1089 ntBASIC12.51□□□□□ -0.41
Pde6bP23440 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC12.51□□□□□ -0.41
Pde6bP23440 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pde6bP23440 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pde6bP23440 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Pde6bP23440 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6bP23440 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6bP23440 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6bP23440 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6bP23440 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6bP23440 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6bP23440 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6bP23440 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6bP23440 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6bP23440 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pde6bP23440 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pde6bP23440 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pde6bP23440 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
Pde6bP23440 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6bP23440 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pde6bP23440 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6bP23440 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6bP23440 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6bP23440 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6bP23440 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pde6bP23440 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6bP23440 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6bP23440 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6bP23440 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6bP23440 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pde6bP23440 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pde6bP23440 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Pde6bP23440 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms