Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Clk1P22518 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Clk1P22518 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.75□□□□□ -0.69
Clk1P22518 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC10.75□□□□□ -0.69
Clk1P22518 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Clk1P22518 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Clk1P22518 Mir6420-201ENSMUST00000185032 102 ntBASIC10.75□□□□□ -0.69
Clk1P22518 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.75□□□□□ -0.69
Clk1P22518 Gm18730-201ENSMUST00000218038 343 ntBASIC10.75□□□□□ -0.69
Clk1P22518 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Clk1P22518 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Clk1P22518 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Clk1P22518 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Clk1P22518 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Clk1P22518 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Clk1P22518 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Clk1P22518 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Clk1P22518 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.75□□□□□ -0.69
Clk1P22518 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Clk1P22518 Gm37307-201ENSMUST00000193663 2621 ntBASIC10.75□□□□□ -0.69
Clk1P22518 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC10.75□□□□□ -0.69
Clk1P22518 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Clk1P22518 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
Clk1P22518 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC10.75□□□□□ -0.69
Clk1P22518 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Clk1P22518 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
Clk1P22518 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.75□□□□□ -0.69
Clk1P22518 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Clk1P22518 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Clk1P22518 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Clk1P22518 Gm9220-201ENSMUST00000190721 2544 ntBASIC10.75□□□□□ -0.69
Clk1P22518 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Clk1P22518 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.74□□□□□ -0.69
Clk1P22518 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Clk1P22518 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clk1P22518 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clk1P22518 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clk1P22518 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clk1P22518 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clk1P22518 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clk1P22518 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Clk1P22518 Tomt-201ENSMUST00000106969 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clk1P22518 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.74□□□□□ -0.69
Clk1P22518 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.74□□□□□ -0.69
Clk1P22518 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.74□□□□□ -0.69
Clk1P22518 Gm14724-201ENSMUST00000118400 537 ntBASIC10.74□□□□□ -0.69
Clk1P22518 Gm12266-201ENSMUST00000120311 962 ntBASIC10.74□□□□□ -0.69
Clk1P22518 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Clk1P22518 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.74□□□□□ -0.69
Clk1P22518 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.74□□□□□ -0.69
Clk1P22518 Gm24749-201ENSMUST00000157838 343 ntBASIC10.74□□□□□ -0.69
Clk1P22518 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clk1P22518 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.74□□□□□ -0.69
Clk1P22518 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Clk1P22518 Gm9136-201ENSMUST00000193368 454 ntBASIC10.74□□□□□ -0.69
Clk1P22518 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Clk1P22518 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.74□□□□□ -0.69
Clk1P22518 Gm6450-201ENSMUST00000200896 574 ntBASIC10.74□□□□□ -0.69
Clk1P22518 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
Clk1P22518 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.74□□□□□ -0.69
Clk1P22518 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC10.74□□□□□ -0.69
Clk1P22518 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.74□□□□□ -0.69
Clk1P22518 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.74□□□□□ -0.69
Clk1P22518 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.74□□□□□ -0.69
Clk1P22518 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clk1P22518 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clk1P22518 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clk1P22518 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Clk1P22518 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clk1P22518 Slc23a1-201ENSMUST00000025212 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clk1P22518 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clk1P22518 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.74□□□□□ -0.69
Clk1P22518 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clk1P22518 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clk1P22518 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Clk1P22518 Fes-201ENSMUST00000080932 2762 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clk1P22518 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clk1P22518 Rd3-202ENSMUST00000180463 3724 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clk1P22518 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Clk1P22518 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clk1P22518 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clk1P22518 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.74□□□□□ -0.69
Clk1P22518 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Clk1P22518 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Clk1P22518 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Clk1P22518 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Clk1P22518 Gm38001-201ENSMUST00000192900 3761 ntBASIC10.73□□□□□ -0.69
Clk1P22518 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Clk1P22518 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Clk1P22518 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Clk1P22518 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Clk1P22518 Hmgb1-201ENSMUST00000085546 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Clk1P22518 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Clk1P22518 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Clk1P22518 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.73□□□□□ -0.69
Clk1P22518 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Clk1P22518 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Clk1P22518 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.73□□□□□ -0.69
Clk1P22518 Gm43615-201ENSMUST00000197465 1773 ntBASIC10.73□□□□□ -0.69
Clk1P22518 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms