Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
BdnfP21237 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
BdnfP21237 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
BdnfP21237 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
BdnfP21237 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
BdnfP21237 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
BdnfP21237 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
BdnfP21237 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC10.97□□□□□ -0.65
BdnfP21237 Gm26286-201ENSMUST00000104166 134 ntBASIC10.97□□□□□ -0.65
BdnfP21237 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
BdnfP21237 Gm13296-201ENSMUST00000117854 997 ntBASIC10.97□□□□□ -0.65
BdnfP21237 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
BdnfP21237 Gm15276-201ENSMUST00000145953 498 ntBASIC10.97□□□□□ -0.65
BdnfP21237 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC10.97□□□□□ -0.65
BdnfP21237 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
BdnfP21237 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
BdnfP21237 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
BdnfP21237 Gm38317-201ENSMUST00000195564 343 ntBASIC10.97□□□□□ -0.65
BdnfP21237 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
BdnfP21237 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
BdnfP21237 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.97□□□□□ -0.65
BdnfP21237 Gm9899-201ENSMUST00000065519 555 ntBASIC10.97□□□□□ -0.65
BdnfP21237 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
BdnfP21237 Olfr582-201ENSMUST00000098212 960 ntBASIC10.97□□□□□ -0.65
BdnfP21237 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
BdnfP21237 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.97□□□□□ -0.65
BdnfP21237 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
BdnfP21237 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
BdnfP21237 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
BdnfP21237 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
BdnfP21237 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
BdnfP21237 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
BdnfP21237 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
BdnfP21237 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
BdnfP21237 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
BdnfP21237 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
BdnfP21237 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
BdnfP21237 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
BdnfP21237 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.97□□□□□ -0.65
BdnfP21237 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.97□□□□□ -0.65
BdnfP21237 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
BdnfP21237 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
BdnfP21237 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.97□□□□□ -0.65
BdnfP21237 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.97□□□□□ -0.65
BdnfP21237 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
BdnfP21237 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
BdnfP21237 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
BdnfP21237 Olfr169-203ENSMUST00000215476 2476 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
BdnfP21237 Gm38910-201ENSMUST00000204630 2448 ntBASIC10.96□□□□□ -0.65
BdnfP21237 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
BdnfP21237 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
BdnfP21237 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
BdnfP21237 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
BdnfP21237 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
BdnfP21237 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
BdnfP21237 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
BdnfP21237 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.96□□□□□ -0.65
BdnfP21237 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
BdnfP21237 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
BdnfP21237 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.96□□□□□ -0.65
BdnfP21237 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
BdnfP21237 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
BdnfP21237 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
BdnfP21237 Gm22323-201ENSMUST00000103832 109 ntBASIC10.96□□□□□ -0.65
BdnfP21237 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
BdnfP21237 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.96□□□□□ -0.65
BdnfP21237 Gm17376-201ENSMUST00000166016 84 ntBASIC10.96□□□□□ -0.65
BdnfP21237 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.96□□□□□ -0.65
BdnfP21237 Ighv1-62-201ENSMUST00000193406 350 ntBASIC10.96□□□□□ -0.65
BdnfP21237 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC10.96□□□□□ -0.65
BdnfP21237 Gm43179-201ENSMUST00000198797 275 ntBASIC10.96□□□□□ -0.65
BdnfP21237 Gm3961-201ENSMUST00000204425 994 ntBASIC10.96□□□□□ -0.65
BdnfP21237 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
BdnfP21237 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
BdnfP21237 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
BdnfP21237 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
BdnfP21237 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
BdnfP21237 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
BdnfP21237 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
BdnfP21237 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.66
BdnfP21237 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
BdnfP21237 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.66
BdnfP21237 P3h1-202ENSMUST00000081606 2820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
BdnfP21237 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
BdnfP21237 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
BdnfP21237 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
BdnfP21237 Gm9271-201ENSMUST00000185988 2580 ntBASIC10.96□□□□□ -0.66
BdnfP21237 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.96□□□□□ -0.66
BdnfP21237 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
BdnfP21237 Fndc9-201ENSMUST00000060185 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
BdnfP21237 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
BdnfP21237 Actr2-201ENSMUST00000000137 3631 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
BdnfP21237 Togaram2-201ENSMUST00000097284 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
BdnfP21237 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
BdnfP21237 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
BdnfP21237 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.95□□□□□ -0.66
BdnfP21237 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
BdnfP21237 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.95□□□□□ -0.66
BdnfP21237 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
BdnfP21237 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms