Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl3P10855 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl3P10855 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl3P10855 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl3P10855 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl3P10855 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl3P10855 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl3P10855 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl3P10855 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Ccl3P10855 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl3P10855 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.06□□□□□ -0.8
Ccl3P10855 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl3P10855 Gm9244-201ENSMUST00000056767 2129 ntBASIC10.06□□□□□ -0.8
Ccl3P10855 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl3P10855 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC10.06□□□□□ -0.8
Ccl3P10855 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Ccl3P10855 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl3P10855 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl3P10855 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl3P10855 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl3P10855 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Ccl3P10855 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl3P10855 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl3P10855 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl3P10855 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl3P10855 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.05□□□□□ -0.8
Ccl3P10855 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl3P10855 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.05□□□□□ -0.8
Ccl3P10855 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Ccl3P10855 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl3P10855 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl3P10855 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl3P10855 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl3P10855 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC10.05□□□□□ -0.8
Ccl3P10855 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Ccl3P10855 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Ccl3P10855 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl3P10855 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC10.05□□□□□ -0.8
Ccl3P10855 Gm13039-201ENSMUST00000118638 794 ntBASIC10.05□□□□□ -0.8
Ccl3P10855 Gm3828-201ENSMUST00000121817 257 ntBASIC10.05□□□□□ -0.8
Ccl3P10855 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC10.05□□□□□ -0.8
Ccl3P10855 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC10.05□□□□□ -0.8
Ccl3P10855 Gm24328-201ENSMUST00000175104 67 ntBASIC10.05□□□□□ -0.8
Ccl3P10855 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Ccl3P10855 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Ccl3P10855 Gm31274-201ENSMUST00000197356 229 ntBASIC10.05□□□□□ -0.8
Ccl3P10855 Trav11n-201ENSMUST00000200113 343 ntBASIC10.05□□□□□ -0.8
Ccl3P10855 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC10.05□□□□□ -0.8
Ccl3P10855 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC10.05□□□□□ -0.8
Ccl3P10855 CT010480.2-201ENSMUST00000225424 737 ntBASIC10.05□□□□□ -0.8
Ccl3P10855 AC142266.1-201ENSMUST00000228107 415 ntBASIC10.05□□□□□ -0.8
Ccl3P10855 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC10.05□□□□□ -0.8
Ccl3P10855 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl3P10855 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl3P10855 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Ccl3P10855 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl3P10855 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl3P10855 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl3P10855 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl3P10855 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl3P10855 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl3P10855 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl3P10855 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Ccl3P10855 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Ccl3P10855 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.05□□□□□ -0.8
Ccl3P10855 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC10.05□□□□□ -0.8
Ccl3P10855 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl3P10855 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC10.05□□□□□ -0.8
Ccl3P10855 AC164107.1-201ENSMUST00000227730 2161 ntBASIC10.05□□□□□ -0.8
Ccl3P10855 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.05□□□□□ -0.8
Ccl3P10855 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.05□□□□□ -0.8
Ccl3P10855 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl3P10855 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl3P10855 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl3P10855 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC10.05□□□□□ -0.8
Ccl3P10855 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl3P10855 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Ccl3P10855 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl3P10855 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl3P10855 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl3P10855 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Ccl3P10855 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl3P10855 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC10.05□□□□□ -0.8
Ccl3P10855 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl3P10855 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Ccl3P10855 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl3P10855 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl3P10855 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl3P10855 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl3P10855 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.04□□□□□ -0.8
Ccl3P10855 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.04□□□□□ -0.8
Ccl3P10855 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.04□□□□□ -0.8
Ccl3P10855 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl3P10855 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
Ccl3P10855 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl3P10855 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl3P10855 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl3P10855 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Ccl3P10855 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl3P10855 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms