Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp6P0C0A3 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Gm5982-201ENSMUST00000196234 512 ntBASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp6P0C0A3 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Gm8731-201ENSMUST00000118088 412 ntBASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Gm13045-201ENSMUST00000119019 712 ntBASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Gm15595-201ENSMUST00000120840 961 ntBASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.42□□□□□ -0.42
Chmp6P0C0A3 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Gm42997-202ENSMUST00000200321 985 ntBASIC12.42□□□□□ -0.42
Chmp6P0C0A3 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.42□□□□□ -0.42
Chmp6P0C0A3 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Gm42427-201ENSMUST00000200473 5292 ntBASIC12.42□□□□□ -0.42
Chmp6P0C0A3 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.42□□□□□ -0.42
Chmp6P0C0A3 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp6P0C0A3 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Chmp6P0C0A3 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms