Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 D9Wsu149-201ENSMUST00000214169 594 ntBASIC10.18□□□□□ -0.78
P06344 AC154257.1-202ENSMUST00000224729 843 ntBASIC10.18□□□□□ -0.78
P06344 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P06344 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P06344 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P06344 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P06344 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.18□□□□□ -0.78
P06344 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P06344 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC10.18□□□□□ -0.78
P06344 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P06344 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P06344 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P06344 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P06344 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
P06344 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P06344 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P06344 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P06344 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
P06344 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
P06344 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P06344 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
P06344 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P06344 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P06344 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
P06344 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.17□□□□□ -0.78
P06344 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.17□□□□□ -0.78
P06344 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
P06344 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
P06344 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.17□□□□□ -0.78
P06344 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC10.17□□□□□ -0.78
P06344 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
P06344 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
P06344 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Mir7076-201ENSMUST00000183519 74 ntBASIC10.17□□□□□ -0.78
P06344 Gm37458-201ENSMUST00000194055 410 ntBASIC10.17□□□□□ -0.78
P06344 Gm43520-201ENSMUST00000197996 164 ntBASIC10.17□□□□□ -0.78
P06344 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
P06344 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC10.17□□□□□ -0.78
P06344 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC10.17□□□□□ -0.78
P06344 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC10.17□□□□□ -0.78
P06344 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC10.17□□□□□ -0.78
P06344 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC10.17□□□□□ -0.78
P06344 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
P06344 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.17□□□□□ -0.78
P06344 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.17□□□□□ -0.78
P06344 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
P06344 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P06344 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
P06344 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.17□□□□□ -0.78
P06344 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P06344 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
P06344 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P06344 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
P06344 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P06344 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P06344 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P06344 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
P06344 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P06344 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P06344 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P06344 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P06344 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P06344 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P06344 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P06344 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.16□□□□□ -0.78
P06344 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms