Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Gm19013-201ENSMUST00000183895 1222 ntBASIC11.8□□□□□ -0.52
PrnpP04925 Gm19014-201ENSMUST00000184828 1189 ntBASIC11.8□□□□□ -0.52
PrnpP04925 Gm19891-201ENSMUST00000189771 303 ntBASIC11.8□□□□□ -0.52
PrnpP04925 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC11.8□□□□□ -0.52
PrnpP04925 Gm42867-201ENSMUST00000202995 469 ntBASIC11.8□□□□□ -0.52
PrnpP04925 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC11.8□□□□□ -0.52
PrnpP04925 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.8□□□□□ -0.52
PrnpP04925 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC11.8□□□□□ -0.52
PrnpP04925 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PrnpP04925 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PrnpP04925 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PrnpP04925 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PrnpP04925 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PrnpP04925 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PrnpP04925 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
PrnpP04925 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PrnpP04925 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
PrnpP04925 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
PrnpP04925 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
PrnpP04925 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PrnpP04925 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PrnpP04925 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
PrnpP04925 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
PrnpP04925 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.8□□□□□ -0.52
PrnpP04925 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
PrnpP04925 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
PrnpP04925 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
PrnpP04925 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
PrnpP04925 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
PrnpP04925 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.79□□□□□ -0.52
PrnpP04925 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.79□□□□□ -0.52
PrnpP04925 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Gm42499-201ENSMUST00000196193 1412 ntBASIC11.79□□□□□ -0.52
PrnpP04925 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.79□□□□□ -0.52
PrnpP04925 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
PrnpP04925 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Gm5434-202ENSMUST00000222384 1451 ntBASIC11.79□□□□□ -0.52
PrnpP04925 Gm5434-201ENSMUST00000071825 1451 ntBASIC11.79□□□□□ -0.52
PrnpP04925 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.79□□□□□ -0.52
PrnpP04925 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC11.79□□□□□ -0.52
PrnpP04925 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
PrnpP04925 Gm37852-201ENSMUST00000193027 350 ntBASIC11.79□□□□□ -0.52
PrnpP04925 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC11.79□□□□□ -0.52
PrnpP04925 Gm43969-201ENSMUST00000204833 535 ntBASIC11.79□□□□□ -0.52
PrnpP04925 Gm6855-201ENSMUST00000206307 790 ntBASIC11.79□□□□□ -0.52
PrnpP04925 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC11.79□□□□□ -0.52
PrnpP04925 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.79□□□□□ -0.52
PrnpP04925 AC142266.1-201ENSMUST00000228107 415 ntBASIC11.79□□□□□ -0.52
PrnpP04925 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC11.79□□□□□ -0.52
PrnpP04925 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
PrnpP04925 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.79□□□□□ -0.52
PrnpP04925 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.79□□□□□ -0.52
PrnpP04925 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PrnpP04925 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PrnpP04925 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.78□□□□□ -0.52
PrnpP04925 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PrnpP04925 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
PrnpP04925 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms