Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CopeO89079 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CopeO89079 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CopeO89079 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CopeO89079 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CopeO89079 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CopeO89079 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CopeO89079 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CopeO89079 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CopeO89079 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
CopeO89079 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CopeO89079 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CopeO89079 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CopeO89079 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.72□□□□□ -0.53
CopeO89079 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.72□□□□□ -0.53
CopeO89079 Gm8752-201ENSMUST00000173427 1694 ntBASIC11.72□□□□□ -0.53
CopeO89079 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CopeO89079 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
CopeO89079 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.72□□□□□ -0.53
CopeO89079 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CopeO89079 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CopeO89079 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.72□□□□□ -0.53
CopeO89079 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.72□□□□□ -0.53
CopeO89079 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.72□□□□□ -0.53
CopeO89079 Gm11783-201ENSMUST00000119549 885 ntBASIC11.72□□□□□ -0.53
CopeO89079 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.72□□□□□ -0.53
CopeO89079 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.72□□□□□ -0.53
CopeO89079 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CopeO89079 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
CopeO89079 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CopeO89079 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.72□□□□□ -0.53
CopeO89079 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CopeO89079 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.72□□□□□ -0.53
CopeO89079 Gm18062-201ENSMUST00000208020 547 ntBASIC11.72□□□□□ -0.53
CopeO89079 Gm18055-201ENSMUST00000208254 547 ntBASIC11.72□□□□□ -0.53
CopeO89079 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC11.72□□□□□ -0.53
CopeO89079 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CopeO89079 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
CopeO89079 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CopeO89079 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
CopeO89079 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CopeO89079 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
CopeO89079 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CopeO89079 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CopeO89079 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.72□□□□□ -0.53
CopeO89079 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CopeO89079 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.72□□□□□ -0.53
CopeO89079 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
CopeO89079 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
CopeO89079 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
CopeO89079 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
CopeO89079 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CopeO89079 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
CopeO89079 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CopeO89079 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CopeO89079 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CopeO89079 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
CopeO89079 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CopeO89079 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
CopeO89079 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CopeO89079 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.71□□□□□ -0.53
CopeO89079 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CopeO89079 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CopeO89079 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
CopeO89079 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CopeO89079 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
CopeO89079 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CopeO89079 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
CopeO89079 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
CopeO89079 Gm11509-201ENSMUST00000117358 325 ntBASIC11.71□□□□□ -0.53
CopeO89079 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CopeO89079 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CopeO89079 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
CopeO89079 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.71□□□□□ -0.53
CopeO89079 Gm5745-201ENSMUST00000183748 313 ntBASIC11.71□□□□□ -0.53
CopeO89079 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CopeO89079 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
CopeO89079 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.71□□□□□ -0.53
CopeO89079 Gm6334-201ENSMUST00000207083 228 ntBASIC11.71□□□□□ -0.53
CopeO89079 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CopeO89079 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CopeO89079 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CopeO89079 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CopeO89079 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
CopeO89079 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
CopeO89079 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
CopeO89079 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CopeO89079 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CopeO89079 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CopeO89079 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
CopeO89079 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
CopeO89079 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CopeO89079 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CopeO89079 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CopeO89079 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CopeO89079 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.54
CopeO89079 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CopeO89079 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CopeO89079 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CopeO89079 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms