Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cfdp1O88271 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Cfdp1O88271 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cfdp1O88271 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Cfdp1O88271 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cfdp1O88271 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cfdp1O88271 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cfdp1O88271 Rab3c-202ENSMUST00000223922 2398 ntBASIC14.2□□□□□ -0.14
Cfdp1O88271 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cfdp1O88271 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cfdp1O88271 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cfdp1O88271 Gm9415-201ENSMUST00000200462 1321 ntBASIC14.2□□□□□ -0.14
Cfdp1O88271 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cfdp1O88271 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cfdp1O88271 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cfdp1O88271 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cfdp1O88271 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cfdp1O88271 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC14.2□□□□□ -0.14
Cfdp1O88271 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Cfdp1O88271 Gm15528-201ENSMUST00000117821 864 ntBASIC14.2□□□□□ -0.14
Cfdp1O88271 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC14.2□□□□□ -0.14
Cfdp1O88271 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cfdp1O88271 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC14.2□□□□□ -0.14
Cfdp1O88271 Gm5342-201ENSMUST00000181982 1003 ntBASIC14.2□□□□□ -0.14
Cfdp1O88271 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC14.2□□□□□ -0.14
Cfdp1O88271 AC114645.1-201ENSMUST00000215831 187 ntBASIC14.2□□□□□ -0.14
Cfdp1O88271 CT010506.1-201ENSMUST00000223673 349 ntBASIC14.2□□□□□ -0.14
Cfdp1O88271 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cfdp1O88271 Gm10263-201ENSMUST00000085163 300 ntBASIC14.2□□□□□ -0.14
Cfdp1O88271 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC14.2□□□□□ -0.14
Cfdp1O88271 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cfdp1O88271 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cfdp1O88271 AC126257.2-201ENSMUST00000215507 2300 ntBASIC14.2□□□□□ -0.14
Cfdp1O88271 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cfdp1O88271 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cfdp1O88271 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cfdp1O88271 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cfdp1O88271 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cfdp1O88271 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cfdp1O88271 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cfdp1O88271 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfdp1O88271 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfdp1O88271 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cfdp1O88271 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfdp1O88271 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Cfdp1O88271 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfdp1O88271 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfdp1O88271 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfdp1O88271 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfdp1O88271 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cfdp1O88271 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfdp1O88271 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cfdp1O88271 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC14.19□□□□□ -0.14
Cfdp1O88271 Gm14740-201ENSMUST00000118538 1150 ntBASIC14.19□□□□□ -0.14
Cfdp1O88271 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Cfdp1O88271 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfdp1O88271 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC14.19□□□□□ -0.14
Cfdp1O88271 Gm24992-201ENSMUST00000157412 130 ntBASIC14.19□□□□□ -0.14
Cfdp1O88271 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cfdp1O88271 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cfdp1O88271 Gm29067-201ENSMUST00000190821 470 ntBASIC14.19□□□□□ -0.14
Cfdp1O88271 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cfdp1O88271 Gm43163-201ENSMUST00000196571 442 ntBASIC14.19□□□□□ -0.14
Cfdp1O88271 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC14.19□□□□□ -0.14
Cfdp1O88271 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC14.19□□□□□ -0.14
Cfdp1O88271 Gm10752-201ENSMUST00000218348 729 ntBASIC14.19□□□□□ -0.14
Cfdp1O88271 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC14.19□□□□□ -0.14
Cfdp1O88271 CT025553.1-201ENSMUST00000226292 299 ntBASIC14.19□□□□□ -0.14
Cfdp1O88271 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfdp1O88271 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfdp1O88271 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfdp1O88271 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cfdp1O88271 Gm23680-201ENSMUST00000083162 164 ntBASIC14.19□□□□□ -0.14
Cfdp1O88271 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfdp1O88271 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfdp1O88271 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Cfdp1O88271 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfdp1O88271 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cfdp1O88271 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfdp1O88271 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfdp1O88271 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC14.19□□□□□ -0.14
Cfdp1O88271 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfdp1O88271 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfdp1O88271 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cfdp1O88271 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cfdp1O88271 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cfdp1O88271 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Cfdp1O88271 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cfdp1O88271 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC14.18□□□□□ -0.14
Cfdp1O88271 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cfdp1O88271 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cfdp1O88271 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC14.18□□□□□ -0.14
Cfdp1O88271 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cfdp1O88271 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cfdp1O88271 Gm15617-201ENSMUST00000118973 771 ntBASIC14.18□□□□□ -0.14
Cfdp1O88271 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC14.18□□□□□ -0.14
Cfdp1O88271 Gm4879-201ENSMUST00000122190 1272 ntBASIC14.18□□□□□ -0.14
Cfdp1O88271 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cfdp1O88271 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cfdp1O88271 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms