Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Itgb3O54890 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Itgb3O54890 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Itgb3O54890 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.08□□□□□ -0.47
Itgb3O54890 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Itgb3O54890 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Itgb3O54890 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.08□□□□□ -0.47
Itgb3O54890 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Itgb3O54890 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Itgb3O54890 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Itgb3O54890 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Itgb3O54890 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Itgb3O54890 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.08□□□□□ -0.48
Itgb3O54890 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Itgb3O54890 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Itgb3O54890 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.08□□□□□ -0.48
Itgb3O54890 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Itgb3O54890 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Itgb3O54890 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Itgb3O54890 Gm15528-201ENSMUST00000117821 864 ntBASIC12.08□□□□□ -0.48
Itgb3O54890 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.08□□□□□ -0.48
Itgb3O54890 Gm15617-201ENSMUST00000118973 771 ntBASIC12.08□□□□□ -0.48
Itgb3O54890 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Itgb3O54890 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Itgb3O54890 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Itgb3O54890 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Itgb3O54890 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Itgb3O54890 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.08□□□□□ -0.48
Itgb3O54890 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Itgb3O54890 Gm27438-201ENSMUST00000183480 110 ntBASIC12.08□□□□□ -0.48
Itgb3O54890 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Itgb3O54890 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Itgb3O54890 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Itgb3O54890 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.08□□□□□ -0.48
Itgb3O54890 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Itgb3O54890 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Itgb3O54890 Gm10263-201ENSMUST00000085163 300 ntBASIC12.08□□□□□ -0.48
Itgb3O54890 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Itgb3O54890 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Itgb3O54890 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Itgb3O54890 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Itgb3O54890 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Itgb3O54890 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Itgb3O54890 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Itgb3O54890 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Itgb3O54890 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Itgb3O54890 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Itgb3O54890 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Itgb3O54890 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Itgb3O54890 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Itgb3O54890 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Itgb3O54890 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Itgb3O54890 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Itgb3O54890 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.07□□□□□ -0.48
Itgb3O54890 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Itgb3O54890 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Itgb3O54890 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.07□□□□□ -0.48
Itgb3O54890 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.07□□□□□ -0.48
Itgb3O54890 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Itgb3O54890 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Itgb3O54890 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Itgb3O54890 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Itgb3O54890 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Itgb3O54890 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Itgb3O54890 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Itgb3O54890 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Itgb3O54890 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Itgb3O54890 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.07□□□□□ -0.48
Itgb3O54890 Gm24992-201ENSMUST00000157412 130 ntBASIC12.07□□□□□ -0.48
Itgb3O54890 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Itgb3O54890 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC12.07□□□□□ -0.48
Itgb3O54890 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.07□□□□□ -0.48
Itgb3O54890 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.07□□□□□ -0.48
Itgb3O54890 Gm29067-201ENSMUST00000190821 470 ntBASIC12.07□□□□□ -0.48
Itgb3O54890 Gm34023-201ENSMUST00000195539 217 ntBASIC12.07□□□□□ -0.48
Itgb3O54890 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Itgb3O54890 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Itgb3O54890 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.07□□□□□ -0.48
Itgb3O54890 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC12.07□□□□□ -0.48
Itgb3O54890 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.07□□□□□ -0.48
Itgb3O54890 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.07□□□□□ -0.48
Itgb3O54890 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Itgb3O54890 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Itgb3O54890 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Itgb3O54890 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.07□□□□□ -0.48
Itgb3O54890 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Itgb3O54890 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Itgb3O54890 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Itgb3O54890 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Itgb3O54890 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Itgb3O54890 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.07□□□□□ -0.48
Itgb3O54890 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Itgb3O54890 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Itgb3O54890 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Itgb3O54890 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Itgb3O54890 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Itgb3O54890 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.07□□□□□ -0.48
Itgb3O54890 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Itgb3O54890 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Itgb3O54890 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms