Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Pcdh1F7BJK1 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.76
Pcdh1F7BJK1 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Gm14381-201ENSMUST00000122105 414 ntBASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Gm27046-201ENSMUST00000182160 463 ntBASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Rprl1-202ENSMUST00000198476 238 ntBASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Rps4l-202ENSMUST00000204242 789 ntBASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Gm18539-201ENSMUST00000204745 1090 ntBASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Gm45865-201ENSMUST00000211815 945 ntBASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Gm45416-201ENSMUST00000209713 2201 ntBASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Gm11661-201ENSMUST00000121761 1327 ntBASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Pcdh1F7BJK1 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Gm8343-201ENSMUST00000182705 994 ntBASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Gm37597-201ENSMUST00000191853 382 ntBASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Gm43822-201ENSMUST00000200285 476 ntBASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Gm44008-201ENSMUST00000204345 412 ntBASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh1F7BJK1 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms