Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Gm12976-201ENSMUST00000150171 459 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Gm23479-201ENSMUST00000158876 122 ntBASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Gm17147-201ENSMUST00000164176 432 ntBASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 2010008C14Rik-201ENSMUST00000203956 593 ntBASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Gm5424-201ENSMUST00000053865 1240 ntBASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Elobl-202ENSMUST00000082339 300 ntBASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Ccdc188F6WEU2 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Gm24066-201ENSMUST00000104515 131 ntBASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Gm24161-201ENSMUST00000104592 130 ntBASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Gm13215-201ENSMUST00000117559 472 ntBASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Gm13201-201ENSMUST00000144031 600 ntTSL 3 BASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 AI506816-201ENSMUST00000197153 474 ntTSL 5 BASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 AC164429.1-201ENSMUST00000224210 518 ntBASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Gm37651-201ENSMUST00000194679 1494 ntBASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 3110001I22Rik-201ENSMUST00000035426 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ccdc188F6WEU2 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc188F6WEU2 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ccdc188F6WEU2 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc188F6WEU2 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Ccdc188F6WEU2 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc188F6WEU2 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc188F6WEU2 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc188F6WEU2 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc188F6WEU2 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc188F6WEU2 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.47□□□□□ -0.57
Ccdc188F6WEU2 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc188F6WEU2 Gm42858-201ENSMUST00000202512 1704 ntBASIC11.47□□□□□ -0.57
Ccdc188F6WEU2 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ccdc188F6WEU2 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc188F6WEU2 Gm10537-201ENSMUST00000192625 1698 ntBASIC11.47□□□□□ -0.57
Ccdc188F6WEU2 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ccdc188F6WEU2 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc188F6WEU2 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc188F6WEU2 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC11.47□□□□□ -0.57
Ccdc188F6WEU2 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ccdc188F6WEU2 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.47□□□□□ -0.57
Ccdc188F6WEU2 Gm14715-201ENSMUST00000156823 643 ntTSL 3 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 641.7 ms