Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Gm14219-201ENSMUST00000120414 288 ntBASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Gm10169-201ENSMUST00000121822 348 ntBASIC11.29□□□□□ -0.6
Srp54bE9PXC0 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Gm6407-201ENSMUST00000176468 549 ntBASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Gm9116-201ENSMUST00000192400 1018 ntBASIC11.29□□□□□ -0.6
Srp54bE9PXC0 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.29□□□□□ -0.6
Srp54bE9PXC0 AC154184.3-201ENSMUST00000225620 1090 ntBASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Gm12274-201ENSMUST00000120062 385 ntBASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Gm12030-201ENSMUST00000121917 223 ntBASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Gm22877-201ENSMUST00000175451 105 ntBASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Gm23694-201ENSMUST00000179335 110 ntBASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.28□□□□□ -0.6
Srp54bE9PXC0 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Gm43163-201ENSMUST00000196571 442 ntBASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.28□□□□□ -0.6
Srp54bE9PXC0 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.28□□□□□ -0.6
Srp54bE9PXC0 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Srp54bE9PXC0 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Srp54bE9PXC0 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Srp54bE9PXC0 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Srp54bE9PXC0 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Srp54bE9PXC0 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.27□□□□□ -0.6
Srp54bE9PXC0 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Srp54bE9PXC0 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.27□□□□□ -0.6
Srp54bE9PXC0 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Gm25880-201ENSMUST00000104331 132 ntBASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Gm14807-201ENSMUST00000116640 983 ntBASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Gm11422-201ENSMUST00000118925 1103 ntBASIC11.27□□□□□ -0.61
Srp54bE9PXC0 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms