Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccnb1ip1D3Z3K2 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Ccnb1ip1D3Z3K2 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccnb1ip1D3Z3K2 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccnb1ip1D3Z3K2 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Ccnb1ip1D3Z3K2 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ccnb1ip1D3Z3K2 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.23□□□□□ -0.77
Ccnb1ip1D3Z3K2 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ccnb1ip1D3Z3K2 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccnb1ip1D3Z3K2 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ccnb1ip1D3Z3K2 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccnb1ip1D3Z3K2 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccnb1ip1D3Z3K2 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.23□□□□□ -0.77
Ccnb1ip1D3Z3K2 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm3365-201ENSMUST00000216296 1480 ntBASIC10.23□□□□□ -0.77
Ccnb1ip1D3Z3K2 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccnb1ip1D3Z3K2 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccnb1ip1D3Z3K2 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC10.23□□□□□ -0.77
Ccnb1ip1D3Z3K2 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccnb1ip1D3Z3K2 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm43274-201ENSMUST00000202545 5000 ntBASIC10.23□□□□□ -0.77
Ccnb1ip1D3Z3K2 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ccnb1ip1D3Z3K2 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ccnb1ip1D3Z3K2 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm13126-201ENSMUST00000117079 3063 ntBASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 AC144938.1-201ENSMUST00000223994 2167 ntBASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Tti2-201ENSMUST00000098842 5039 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm11298-201ENSMUST00000120503 1799 ntBASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 AC149588.2-201ENSMUST00000228182 1859 ntBASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm18624-201ENSMUST00000220966 658 ntBASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ccnb1ip1D3Z3K2 AC122367.1-201ENSMUST00000221978 1709 ntBASIC10.21□□□□□ -0.77
Ccnb1ip1D3Z3K2 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ccnb1ip1D3Z3K2 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccnb1ip1D3Z3K2 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm7103-201ENSMUST00000195642 1852 ntBASIC10.21□□□□□ -0.77
Ccnb1ip1D3Z3K2 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccnb1ip1D3Z3K2 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccnb1ip1D3Z3K2 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccnb1ip1D3Z3K2 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccnb1ip1D3Z3K2 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
Ccnb1ip1D3Z3K2 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ccnb1ip1D3Z3K2 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Ccnb1ip1D3Z3K2 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccnb1ip1D3Z3K2 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ccnb1ip1D3Z3K2 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccnb1ip1D3Z3K2 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.21□□□□□ -0.77
Ccnb1ip1D3Z3K2 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.21□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm4857-201ENSMUST00000192718 785 ntBASIC10.21□□□□□ -0.77
Ccnb1ip1D3Z3K2 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.21□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm42588-201ENSMUST00000200538 1297 ntBASIC10.21□□□□□ -0.77
Ccnb1ip1D3Z3K2 Gm18584-201ENSMUST00000203098 964 ntBASIC10.21□□□□□ -0.77
Ccnb1ip1D3Z3K2 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.21□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms