Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clrn2B2RVW2 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Clrn2B2RVW2 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clrn2B2RVW2 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clrn2B2RVW2 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clrn2B2RVW2 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Clrn2B2RVW2 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Gm19680-201ENSMUST00000095050 1513 ntBASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Gm11470-201ENSMUST00000118868 1475 ntBASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Gm15617-201ENSMUST00000118973 771 ntBASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Gm15196-201ENSMUST00000121406 482 ntBASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Gm24328-201ENSMUST00000175104 67 ntBASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Gm43610-201ENSMUST00000199117 365 ntBASIC13.18□□□□□ -0.3
Clrn2B2RVW2 CT010480.2-201ENSMUST00000225424 737 ntBASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Gm38194-201ENSMUST00000194529 2211 ntBASIC13.18□□□□□ -0.3
Clrn2B2RVW2 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clrn2B2RVW2 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Erich3-203ENSMUST00000189969 3460 ntBASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Gm45135-201ENSMUST00000206787 1184 ntBASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Gm45085-201ENSMUST00000209100 441 ntBASIC13.17□□□□□ -0.3
Clrn2B2RVW2 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 AC162932.1-201ENSMUST00000219209 872 ntBASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clrn2B2RVW2 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms